RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
CPSF1P1-201ENST00000397477 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
CPSF1P1-201ENST00000397477 ZBTB40Q9NUA8 1239 aa13.03□□□□□ -0.32
CPSF1P1-201ENST00000397477 AAMPQ13685 434 aa13.03□□□□□ -0.32
CPSF1P1-201ENST00000397477 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.32
CPSF1P1-201ENST00000397477 NOL8Q76FK4 1167 aaKnown RBP13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 STK31Q9BXU1 1019 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 TNRQ92752 1358 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
CPSF1P1-201ENST00000397477 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
CPSF1P1-201ENST00000397477 IL16Q14005 1332 aa13□□□□□ -0.33
CPSF1P1-201ENST00000397477 CAMSAP1Q5T5Y3 1602 aa13□□□□□ -0.33
CPSF1P1-201ENST00000397477 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
CPSF1P1-201ENST00000397477 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
CPSF1P1-201ENST00000397477 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
CPSF1P1-201ENST00000397477 USP19O94966 1318 aa12.99□□□□□ -0.33
CPSF1P1-201ENST00000397477 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
CPSF1P1-201ENST00000397477 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
CPSF1P1-201ENST00000397477 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
CPSF1P1-201ENST00000397477 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
CPSF1P1-201ENST00000397477 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 PTPRMP28827 1452 aa12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 TRIM6-TRIM34B2RNG4 842 aa12.98□□□□□ -0.33
CPSF1P1-201ENST00000397477 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 PIK3C2BO00750 1634 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 NUCB1Q02818 461 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 MEIS3Q99687 375 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 PSME1Q06323 249 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 RILPL2Q969X0 211 aa12.97□□□□□ -0.33
CPSF1P1-201ENST00000397477 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.33
CPSF1P1-201ENST00000397477 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.34
CPSF1P1-201ENST00000397477 CASC1Q6TDU7 716 aa12.96□□□□□ -0.34
CPSF1P1-201ENST00000397477 ALKQ9UM73 1620 aa12.96□□□□□ -0.34
CPSF1P1-201ENST00000397477 G2E3Q7L622 706 aa12.95□□□□□ -0.34
CPSF1P1-201ENST00000397477 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
CPSF1P1-201ENST00000397477 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
CPSF1P1-201ENST00000397477 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
CPSF1P1-201ENST00000397477 PPLO60437 1756 aa12.95□□□□□ -0.34
CPSF1P1-201ENST00000397477 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 KCNA6P17658 529 aa12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 SIGLEC1Q9BZZ2 1709 aa12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
CPSF1P1-201ENST00000397477 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
CPSF1P1-201ENST00000397477 ANXA1P04083 346 aa12.93□□□□□ -0.34
CPSF1P1-201ENST00000397477 EYA1Q99502 592 aa12.93□□□□□ -0.34
CPSF1P1-201ENST00000397477 HMMRO75330 724 aa12.92□□□□□ -0.34
CPSF1P1-201ENST00000397477 CDC45O75419 566 aa12.92□□□□□ -0.34
CPSF1P1-201ENST00000397477 TMEM2Q9UHN6 1383 aa12.92□□□□□ -0.34
CPSF1P1-201ENST00000397477 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
CPSF1P1-201ENST00000397477 SIRT2Q8IXJ6 389 aa12.91□□□□□ -0.34
CPSF1P1-201ENST00000397477 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
CPSF1P1-201ENST00000397477 MAP4K4O95819 1239 aaPredicted RBP12.91□□□□□ -0.34
CPSF1P1-201ENST00000397477 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
CPSF1P1-201ENST00000397477 TEFQ10587 303 aa12.9□□□□□ -0.34
CPSF1P1-201ENST00000397477 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
CPSF1P1-201ENST00000397477 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
CPSF1P1-201ENST00000397477 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
CPSF1P1-201ENST00000397477 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
CPSF1P1-201ENST00000397477 MCM4P33991 863 aa12.89□□□□□ -0.35
CPSF1P1-201ENST00000397477 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
CPSF1P1-201ENST00000397477 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 TRAK2O60296 914 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 ARHGAP45Q92619 1136 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
CPSF1P1-201ENST00000397477 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
CPSF1P1-201ENST00000397477 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
CPSF1P1-201ENST00000397477 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
CPSF1P1-201ENST00000397477 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
CPSF1P1-201ENST00000397477 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms