RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 MAP3K4Q9Y6R4 1608 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 ANXA1P04083 346 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
MCF2L-205ENST00000397017 EYA1Q99502 592 aa19.03■□□□□ 0.64
MCF2L-205ENST00000397017 TRIM6-TRIM34B2RNG4 842 aa19.03■□□□□ 0.64
MCF2L-205ENST00000397017 IGHDP01880 384 aa19.03■□□□□ 0.64
MCF2L-205ENST00000397017 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
MCF2L-205ENST00000397017 PLEKHO1Q53GL0 409 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-205ENST00000397017 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
MCF2L-205ENST00000397017 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
MCF2L-205ENST00000397017 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
MCF2L-205ENST00000397017 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.63
MCF2L-205ENST00000397017 MADDQ8WXG6 1647 aa19.01■□□□□ 0.63
MCF2L-205ENST00000397017 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
MCF2L-205ENST00000397017 TRIM35Q9UPQ4 493 aa19.01■□□□□ 0.63
MCF2L-205ENST00000397017 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
MCF2L-205ENST00000397017 MTHFSDQ2M296 383 aaKnown RBP19.01■□□□□ 0.63
MCF2L-205ENST00000397017 IL13P35225 146 aa19■□□□□ 0.63
MCF2L-205ENST00000397017 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
MCF2L-205ENST00000397017 MYL6BP14649 208 aa18.99■□□□□ 0.63
MCF2L-205ENST00000397017 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
MCF2L-205ENST00000397017 HMMRO75330 724 aa18.98■□□□□ 0.63
MCF2L-205ENST00000397017 PCDHB15Q9Y5E8 787 aa18.98■□□□□ 0.63
MCF2L-205ENST00000397017 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
MCF2L-205ENST00000397017 FRMPD1Q5SYB0 1578 aa18.98■□□□□ 0.63
MCF2L-205ENST00000397017 CFAP44Q96MT7 982 aa18.97■□□□□ 0.63
MCF2L-205ENST00000397017 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
MCF2L-205ENST00000397017 GCP02774 474 aa18.97■□□□□ 0.63
MCF2L-205ENST00000397017 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-205ENST00000397017 RILPL2Q969X0 211 aa18.97■□□□□ 0.63
MCF2L-205ENST00000397017 BTBD11A6QL63 1104 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 IFT57Q9NWB7 429 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 NPHP1O15259 732 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 NOL8Q76FK4 1167 aaKnown RBP18.96■□□□□ 0.63
MCF2L-205ENST00000397017 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 C19orf44Q9H6X5 657 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 ADGRB3O60242 1522 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 KAT6BQ8WYB5 2073 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
MCF2L-205ENST00000397017 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
MCF2L-205ENST00000397017 PTCD1O75127 700 aaKnown RBP18.95■□□□□ 0.62
MCF2L-205ENST00000397017 HSP90AB1P08238 724 aaKnown RBP18.94■□□□□ 0.62
MCF2L-205ENST00000397017 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 KCNJ4P48050 445 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 CADPS2Q86UW7 1296 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
MCF2L-205ENST00000397017 HOXC9P31274 260 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 RIC3Q7Z5B4 369 aa18.93■□□□□ 0.62
MCF2L-205ENST00000397017 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-205ENST00000397017 BACH2Q9BYV9 841 aa18.92■□□□□ 0.62
MCF2L-205ENST00000397017 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
MCF2L-205ENST00000397017 CAMSAP1Q5T5Y3 1602 aa18.91■□□□□ 0.62
MCF2L-205ENST00000397017 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
MCF2L-205ENST00000397017 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-205ENST00000397017 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-205ENST00000397017 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-205ENST00000397017 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
MCF2L-205ENST00000397017 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
MCF2L-205ENST00000397017 GLI2P10070 1586 aa18.9■□□□□ 0.62
MCF2L-205ENST00000397017 CLTCQ00610 1675 aaKnown RBP18.9■□□□□ 0.62
MCF2L-205ENST00000397017 VAMP4O75379 141 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-205ENST00000397017 CABP4P57796 275 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 EXOC6BQ9Y2D4 811 aa18.89■□□□□ 0.61
MCF2L-205ENST00000397017 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-205ENST00000397017 HSCBQ8IWL3 235 aa18.88■□□□□ 0.61
MCF2L-205ENST00000397017 FLT4P35916 1363 aa18.88■□□□□ 0.61
MCF2L-205ENST00000397017 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
MCF2L-205ENST00000397017 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
MCF2L-205ENST00000397017 SYNMO15061 1565 aa18.87■□□□□ 0.61
MCF2L-205ENST00000397017 SURF6O75683 361 aaKnown RBP18.87■□□□□ 0.61
MCF2L-205ENST00000397017 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
MCF2L-205ENST00000397017 PLEKHF1Q96S99 279 aa18.86■□□□□ 0.61
MCF2L-205ENST00000397017 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
MCF2L-205ENST00000397017 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-205ENST00000397017 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
MCF2L-205ENST00000397017 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
MCF2L-205ENST00000397017 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
MCF2L-205ENST00000397017 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
MCF2L-205ENST00000397017 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
MCF2L-205ENST00000397017 ZMYM4Q5VZL5 1548 aa18.84■□□□□ 0.61
MCF2L-205ENST00000397017 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
MCF2L-205ENST00000397017 SIL1Q9H173 461 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 SPG7Q9UQ90 795 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 ZNF521Q96K83 1311 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 MSH6P52701 1360 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 ALDH1L2Q3SY69 923 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.61
MCF2L-205ENST00000397017 MSH5O43196 834 aa18.83■□□□□ 0.6
MCF2L-205ENST00000397017 G2E3Q7L622 706 aa18.83■□□□□ 0.6
MCF2L-205ENST00000397017 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms