RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
TRIM39-205ENST00000396551 PDZRN3Q9UPQ7 1066 aa21.17■□□□□ 0.98
TRIM39-205ENST00000396551 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
TRIM39-205ENST00000396551 OVOS2A0A0J9YW53 1432 aa21.16■□□□□ 0.98
TRIM39-205ENST00000396551 OVOS2Q6IE36 1432 aa21.16■□□□□ 0.98
TRIM39-205ENST00000396551 RWDD1Q9H446 243 aaPredicted RBP21.16■□□□□ 0.98
TRIM39-205ENST00000396551 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
TRIM39-205ENST00000396551 PLEKHG3A1L390 1219 aa21.16■□□□□ 0.98
TRIM39-205ENST00000396551 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
TRIM39-205ENST00000396551 USP6P35125 1406 aa21.15■□□□□ 0.98
TRIM39-205ENST00000396551 PEAK1Q9H792 1746 aa21.14■□□□□ 0.97
TRIM39-205ENST00000396551 KIF16BQ96L93 1317 aa21.14■□□□□ 0.97
TRIM39-205ENST00000396551 ITPRIPQ8IWB1 547 aa21.14■□□□□ 0.97
TRIM39-205ENST00000396551 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
TRIM39-205ENST00000396551 EID1Q9Y6B2 187 aa21.14■□□□□ 0.97
TRIM39-205ENST00000396551 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
TRIM39-205ENST00000396551 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
TRIM39-205ENST00000396551 ZNF853P0CG23 659 aa21.12■□□□□ 0.97
TRIM39-205ENST00000396551 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
TRIM39-205ENST00000396551 USP19O94966 1318 aa21.12■□□□□ 0.97
TRIM39-205ENST00000396551 RGPD8O14715 1765 aaPredicted RBP21.12■□□□□ 0.97
TRIM39-205ENST00000396551 IFT57Q9NWB7 429 aa21.12■□□□□ 0.97
TRIM39-205ENST00000396551 SSH2Q76I76 1423 aa21.11■□□□□ 0.97
TRIM39-205ENST00000396551 VAMP4O75379 141 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 SEC24BO95487 1268 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 TSPYL6Q8N831 410 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 BRPF1P55201 1214 aaPredicted RBP21.1■□□□□ 0.97
TRIM39-205ENST00000396551 GNAI1P63096 354 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
TRIM39-205ENST00000396551 EIF4A2Q14240 407 aaKnown RBP21.1■□□□□ 0.97
TRIM39-205ENST00000396551 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 PTCH1Q13635 1447 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 MBIPQ9NS73 344 aa21.1■□□□□ 0.97
TRIM39-205ENST00000396551 IPO8O15397 1037 aaKnown RBP21.09■□□□□ 0.97
TRIM39-205ENST00000396551 SLC4A3P48751 1232 aa21.09■□□□□ 0.97
TRIM39-205ENST00000396551 ZNF428Q96B54 188 aa21.09■□□□□ 0.97
TRIM39-205ENST00000396551 RGPD1P0DJD0 1748 aa21.09■□□□□ 0.97
TRIM39-205ENST00000396551 AEBP1Q8IUX7 1158 aa21.08■□□□□ 0.97
TRIM39-205ENST00000396551 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
TRIM39-205ENST00000396551 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
TRIM39-205ENST00000396551 FAM83GA6ND36 823 aa21.08■□□□□ 0.97
TRIM39-205ENST00000396551 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
TRIM39-205ENST00000396551 USP31Q70CQ4 1352 aa21.08■□□□□ 0.96
TRIM39-205ENST00000396551 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
TRIM39-205ENST00000396551 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
TRIM39-205ENST00000396551 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
TRIM39-205ENST00000396551 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
TRIM39-205ENST00000396551 CFAP44Q96MT7 982 aa21.05■□□□□ 0.96
TRIM39-205ENST00000396551 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
TRIM39-205ENST00000396551 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
TRIM39-205ENST00000396551 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-205ENST00000396551 RIMS1Q86UR5 1692 aaKnown RBP21.04■□□□□ 0.96
TRIM39-205ENST00000396551 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
TRIM39-205ENST00000396551 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-205ENST00000396551 C8orf58Q8NAV2 365 aa21.03■□□□□ 0.96
TRIM39-205ENST00000396551 SMC5Q8IY18 1101 aa21.02■□□□□ 0.96
TRIM39-205ENST00000396551 PIK3R4Q99570 1358 aa21.02■□□□□ 0.96
TRIM39-205ENST00000396551 TWISTNBQ3B726 338 aaPredicted RBP21.02■□□□□ 0.95
TRIM39-205ENST00000396551 PIK3C2AO00443 1686 aa21.01■□□□□ 0.95
TRIM39-205ENST00000396551 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
TRIM39-205ENST00000396551 SOX12O15370 315 aa21■□□□□ 0.95
TRIM39-205ENST00000396551 ARHGAP45Q92619 1136 aa21■□□□□ 0.95
TRIM39-205ENST00000396551 DEKP35659 375 aaKnown RBP21■□□□□ 0.95
TRIM39-205ENST00000396551 RTL5Q5HYW3 569 aaPredicted RBP21■□□□□ 0.95
TRIM39-205ENST00000396551 MAP3K19Q56UN5 1328 aa20.99■□□□□ 0.95
TRIM39-205ENST00000396551 ZBTB7BO15156 539 aaPredicted RBP20.98■□□□□ 0.95
TRIM39-205ENST00000396551 ABCC4O15439 1325 aa20.97■□□□□ 0.95
TRIM39-205ENST00000396551 CEP170BQ9Y4F5 1589 aaPredicted RBP20.97■□□□□ 0.95
TRIM39-205ENST00000396551 DAXXQ9UER7 740 aaPredicted RBP20.97■□□□□ 0.95
TRIM39-205ENST00000396551 MARF1Q9Y4F3 1742 aaKnown RBP20.97■□□□□ 0.95
TRIM39-205ENST00000396551 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
TRIM39-205ENST00000396551 KCNA6P17658 529 aa20.96■□□□□ 0.95
TRIM39-205ENST00000396551 ARHGEF10O15013 1369 aa20.95■□□□□ 0.94
TRIM39-205ENST00000396551 MCM10Q7L590 875 aa20.95■□□□□ 0.94
TRIM39-205ENST00000396551 SBNO1A3KN83 1393 aa20.94■□□□□ 0.94
TRIM39-205ENST00000396551 ANKARQ7Z5J8 1434 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 FLT4P35916 1363 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 CHL1O00533 1208 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 NUCB1Q02818 461 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 C1orf115Q9H7X2 142 aa20.93■□□□□ 0.94
TRIM39-205ENST00000396551 TBC1D32Q96NH3 1257 aa20.92■□□□□ 0.94
TRIM39-205ENST00000396551 USP35Q9P2H5 1018 aa20.92■□□□□ 0.94
TRIM39-205ENST00000396551 CRB1P82279 1406 aa20.92■□□□□ 0.94
TRIM39-205ENST00000396551 USP54Q70EL1 1684 aa20.91■□□□□ 0.94
TRIM39-205ENST00000396551 KDRP35968 1356 aa20.9■□□□□ 0.94
TRIM39-205ENST00000396551 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.94
TRIM39-205ENST00000396551 API5Q9BZZ5 524 aaKnown RBP20.89■□□□□ 0.94
TRIM39-205ENST00000396551 CHD2O14647 1828 aaKnown RBP20.89■□□□□ 0.94
TRIM39-205ENST00000396551 FOXO3O43524 673 aa20.89■□□□□ 0.93
TRIM39-205ENST00000396551 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
TRIM39-205ENST00000396551 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.93
TRIM39-205ENST00000396551 MTHFSDQ2M296 383 aaKnown RBP20.88■□□□□ 0.93
TRIM39-205ENST00000396551 LNPKQ9C0E8 428 aa20.88■□□□□ 0.93
TRIM39-205ENST00000396551 EYA1Q99502 592 aa20.88■□□□□ 0.93
TRIM39-205ENST00000396551 CHMP4BQ9H444 224 aaKnown RBP20.88■□□□□ 0.93
TRIM39-205ENST00000396551 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
TRIM39-205ENST00000396551 IGSF1Q8N6C5 1336 aa20.88■□□□□ 0.93
TRIM39-205ENST00000396551 KIAA0232Q92628 1395 aa20.88■□□□□ 0.93
TRIM39-205ENST00000396551 RGS12O14924 1447 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms