RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CALD1Q05682 793 aaKnown RBP19.27■□□□□ 0.68
CBX3-202ENST00000396386 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
CBX3-202ENST00000396386 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
CBX3-202ENST00000396386 PHACTR3Q96KR7 559 aa19.26■□□□□ 0.67
CBX3-202ENST00000396386 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
CBX3-202ENST00000396386 NWD1Q149M9 1564 aa19.26■□□□□ 0.67
CBX3-202ENST00000396386 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
CBX3-202ENST00000396386 AAMPQ13685 434 aa19.25■□□□□ 0.67
CBX3-202ENST00000396386 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
CBX3-202ENST00000396386 COG6Q9Y2V7 657 aa19.25■□□□□ 0.67
CBX3-202ENST00000396386 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
CBX3-202ENST00000396386 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
CBX3-202ENST00000396386 SBNO1A3KN83 1393 aa19.23■□□□□ 0.67
CBX3-202ENST00000396386 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
CBX3-202ENST00000396386 FLT4P35916 1363 aa19.23■□□□□ 0.67
CBX3-202ENST00000396386 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
CBX3-202ENST00000396386 ARHGEF10O15013 1369 aa19.22■□□□□ 0.67
CBX3-202ENST00000396386 MAP3K19Q56UN5 1328 aa19.2■□□□□ 0.66
CBX3-202ENST00000396386 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
CBX3-202ENST00000396386 RLBP1P12271 317 aa19.2■□□□□ 0.66
CBX3-202ENST00000396386 GNAI1P63096 354 aa19.19■□□□□ 0.66
CBX3-202ENST00000396386 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
CBX3-202ENST00000396386 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
CBX3-202ENST00000396386 KIF16BQ96L93 1317 aa19.19■□□□□ 0.66
CBX3-202ENST00000396386 SOX12O15370 315 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 SULT6B1Q6IMI4 303 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
CBX3-202ENST00000396386 LTN1O94822 1766 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 HSP90AB2PQ58FF8 381 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 AEBP1Q8IUX7 1158 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 FBXO41Q8TF61 875 aa19.18■□□□□ 0.66
CBX3-202ENST00000396386 LAS1LQ9Y4W2 734 aaKnown RBP19.18■□□□□ 0.66
CBX3-202ENST00000396386 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
CBX3-202ENST00000396386 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
CBX3-202ENST00000396386 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
CBX3-202ENST00000396386 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
CBX3-202ENST00000396386 THUMPD2Q9BTF0 503 aaKnown RBP19.17■□□□□ 0.66
CBX3-202ENST00000396386 PDE4AP27815 886 aa19.16■□□□□ 0.66
CBX3-202ENST00000396386 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
CBX3-202ENST00000396386 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
CBX3-202ENST00000396386 SKAP1Q86WV1 359 aa19.16■□□□□ 0.66
CBX3-202ENST00000396386 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
CBX3-202ENST00000396386 NLRP6P59044 892 aa19.15■□□□□ 0.66
CBX3-202ENST00000396386 BACH2Q9BYV9 841 aa19.15■□□□□ 0.66
CBX3-202ENST00000396386 HSPA2P54652 639 aa19.14■□□□□ 0.65
CBX3-202ENST00000396386 ATF7IPQ6VMQ6 1270 aa19.14■□□□□ 0.65
CBX3-202ENST00000396386 TRIM27P14373 513 aa19.14■□□□□ 0.65
CBX3-202ENST00000396386 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.65
CBX3-202ENST00000396386 AMPHP49418 695 aa19.14■□□□□ 0.65
CBX3-202ENST00000396386 KDRP35968 1356 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 MSH5O43196 834 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 IGHDP01880 384 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 KIF1AQ12756 1690 aa19.13■□□□□ 0.65
CBX3-202ENST00000396386 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
CBX3-202ENST00000396386 IPO8O15397 1037 aaKnown RBP19.12■□□□□ 0.65
CBX3-202ENST00000396386 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
CBX3-202ENST00000396386 NOB1Q9ULX3 412 aaKnown RBP19.11■□□□□ 0.65
CBX3-202ENST00000396386 NFAT5O94916 1531 aa19.11■□□□□ 0.65
CBX3-202ENST00000396386 PHRF1Q9P1Y6 1649 aaKnown RBP19.11■□□□□ 0.65
CBX3-202ENST00000396386 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
CBX3-202ENST00000396386 ABTB2Q8N961 1025 aa19.11■□□□□ 0.65
CBX3-202ENST00000396386 IGSF1Q8N6C5 1336 aa19.11■□□□□ 0.65
CBX3-202ENST00000396386 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
CBX3-202ENST00000396386 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
CBX3-202ENST00000396386 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
CBX3-202ENST00000396386 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
CBX3-202ENST00000396386 NUTM2GQ5VZR2 741 aa19.09■□□□□ 0.65
CBX3-202ENST00000396386 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
CBX3-202ENST00000396386 VAMP4O75379 141 aa19.08■□□□□ 0.65
CBX3-202ENST00000396386 ITPRIPQ8IWB1 547 aa19.08■□□□□ 0.65
CBX3-202ENST00000396386 PCDHB15Q9Y5E8 787 aa19.08■□□□□ 0.65
CBX3-202ENST00000396386 STRCQ7RTU9 1775 aa19.08■□□□□ 0.64
CBX3-202ENST00000396386 HOXC9P31274 260 aa19.07■□□□□ 0.64
CBX3-202ENST00000396386 DCTN1Q14203 1278 aa19.07■□□□□ 0.64
CBX3-202ENST00000396386 TRPM3Q9HCF6 1732 aaPredicted RBP19.07■□□□□ 0.64
CBX3-202ENST00000396386 RGS3P49796 1198 aa19.07■□□□□ 0.64
CBX3-202ENST00000396386 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
CBX3-202ENST00000396386 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
CBX3-202ENST00000396386 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
CBX3-202ENST00000396386 RWDD1Q9H446 243 aaPredicted RBP19.06■□□□□ 0.64
CBX3-202ENST00000396386 ERICH6Q7L0X2 663 aa19.05■□□□□ 0.64
CBX3-202ENST00000396386 MRPL50Q8N5N7 158 aaKnown RBP19.05■□□□□ 0.64
CBX3-202ENST00000396386 EYA1Q99502 592 aa19.05■□□□□ 0.64
CBX3-202ENST00000396386 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
CBX3-202ENST00000396386 TMEM57Q8N5G2 664 aa19.05■□□□□ 0.64
CBX3-202ENST00000396386 CRB1P82279 1406 aa19.04■□□□□ 0.64
CBX3-202ENST00000396386 SLIT3O75094 1523 aa19.04■□□□□ 0.64
CBX3-202ENST00000396386 PSME1Q06323 249 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 ARHGAP45Q92619 1136 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 ANP32EQ9BTT0 268 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 MCM10Q7L590 875 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
CBX3-202ENST00000396386 KIAA0232Q92628 1395 aa19.02■□□□□ 0.64
CBX3-202ENST00000396386 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.64
CBX3-202ENST00000396386 HAP1P54257 671 aaPredicted RBP19.02■□□□□ 0.64
CBX3-202ENST00000396386 IPO9Q96P70 1041 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms