RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
CACNB1-202ENST00000394303 FOSBP53539 338 aa16.19■□□□□ 0.18
CACNB1-202ENST00000394303 GORABQ5T7V8 394 aa16.18■□□□□ 0.18
CACNB1-202ENST00000394303 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
CACNB1-202ENST00000394303 ARHGEF5Q12774 1597 aa16.18■□□□□ 0.18
CACNB1-202ENST00000394303 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
CACNB1-202ENST00000394303 MSNP26038 577 aaKnown RBP16.17■□□□□ 0.18
CACNB1-202ENST00000394303 NEK4P51957 841 aa16.17■□□□□ 0.18
CACNB1-202ENST00000394303 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
CACNB1-202ENST00000394303 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-202ENST00000394303 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
CACNB1-202ENST00000394303 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
CACNB1-202ENST00000394303 SKOR2Q2VWA4 1001 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-202ENST00000394303 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
CACNB1-202ENST00000394303 SIL1Q9H173 461 aa16.16■□□□□ 0.18
CACNB1-202ENST00000394303 WASLO00401 505 aaPredicted RBP16.15■□□□□ 0.18
CACNB1-202ENST00000394303 FOXO3O43524 673 aa16.15■□□□□ 0.18
CACNB1-202ENST00000394303 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
CACNB1-202ENST00000394303 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
CACNB1-202ENST00000394303 ZRSR1Q15695 479 aaKnown RBP16.15■□□□□ 0.18
CACNB1-202ENST00000394303 ATAD2Q6PL18 1390 aa16.15■□□□□ 0.18
CACNB1-202ENST00000394303 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
CACNB1-202ENST00000394303 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
CACNB1-202ENST00000394303 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
CACNB1-202ENST00000394303 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 CDC45O75419 566 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 PTMSP20962 102 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
CACNB1-202ENST00000394303 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
CACNB1-202ENST00000394303 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 CCDC173Q0VFZ6 552 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 CDC42BPBQ9Y5S2 1711 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 TTC37Q6PGP7 1564 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 MYL6BP14649 208 aa16.13■□□□□ 0.17
CACNB1-202ENST00000394303 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
CACNB1-202ENST00000394303 REC8O95072 547 aa16.12■□□□□ 0.17
CACNB1-202ENST00000394303 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
CACNB1-202ENST00000394303 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
CACNB1-202ENST00000394303 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
CACNB1-202ENST00000394303 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
CACNB1-202ENST00000394303 INTS3Q68E01 1043 aaKnown RBP16.12■□□□□ 0.17
CACNB1-202ENST00000394303 DRC7Q8IY82 874 aa16.12■□□□□ 0.17
CACNB1-202ENST00000394303 UPF3BQ9BZI7 483 aaKnown RBP16.12■□□□□ 0.17
CACNB1-202ENST00000394303 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
CACNB1-202ENST00000394303 KDM4AO75164 1064 aa16.12■□□□□ 0.17
CACNB1-202ENST00000394303 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
CACNB1-202ENST00000394303 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
CACNB1-202ENST00000394303 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
CACNB1-202ENST00000394303 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
CACNB1-202ENST00000394303 RNF17Q9BXT8 1623 aaKnown RBP16.11■□□□□ 0.17
CACNB1-202ENST00000394303 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
CACNB1-202ENST00000394303 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CACNB1-202ENST00000394303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNB1-202ENST00000394303 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
CACNB1-202ENST00000394303 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 VPS37CA5D8V6 355 aaPredicted RBP16.1■□□□□ 0.17
CACNB1-202ENST00000394303 DTNBO60941 627 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
CACNB1-202ENST00000394303 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 UNC13BO14795 1591 aa16.1■□□□□ 0.17
CACNB1-202ENST00000394303 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
CACNB1-202ENST00000394303 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
CACNB1-202ENST00000394303 SNX21Q969T3 373 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
CACNB1-202ENST00000394303 ACEP12821 1306 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 CHD1O14646 1710 aa16.09■□□□□ 0.17
CACNB1-202ENST00000394303 PRPF40AO75400 957 aaKnown RBP16.08■□□□□ 0.17
CACNB1-202ENST00000394303 JARID2Q92833 1246 aaPredicted RBP16.08■□□□□ 0.17
CACNB1-202ENST00000394303 FBXW7Q969H0 707 aa16.08■□□□□ 0.17
CACNB1-202ENST00000394303 TOMM22Q9NS69 142 aa16.08■□□□□ 0.17
CACNB1-202ENST00000394303 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.17
CACNB1-202ENST00000394303 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 GNAI2P04899 355 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 HDAC1Q13547 482 aaPredicted RBP16.07■□□□□ 0.16
CACNB1-202ENST00000394303 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
CACNB1-202ENST00000394303 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 RBM25P49756 843 aaKnown RBP16.07■□□□□ 0.16
CACNB1-202ENST00000394303 EVA1CP58658 441 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 NEXNQ0ZGT2 675 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 MEIS3Q99687 375 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 IQGAP1P46940 1657 aa16.07■□□□□ 0.16
CACNB1-202ENST00000394303 SSFA2P28290 1259 aa16.06■□□□□ 0.16
CACNB1-202ENST00000394303 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms