RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SBNO2Q9Y2G9 1366 aa10.36□□□□□ -0.75
GABRA1-202ENST00000393943 CCP110O43303 1012 aa10.36□□□□□ -0.75
GABRA1-202ENST00000393943 ZSCAN31Q96LW9 406 aaPredicted RBP10.35□□□□□ -0.75
GABRA1-202ENST00000393943 PSMA5P28066 241 aa10.35□□□□□ -0.75
GABRA1-202ENST00000393943 TRPM1Q7Z4N2 1603 aa10.35□□□□□ -0.75
GABRA1-202ENST00000393943 SYCE3A1L190 88 aa10.35□□□□□ -0.75
GABRA1-202ENST00000393943 KIF2AO00139 706 aaPredicted RBP10.35□□□□□ -0.75
GABRA1-202ENST00000393943 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
GABRA1-202ENST00000393943 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
GABRA1-202ENST00000393943 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 HIP1O00291 1037 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
GABRA1-202ENST00000393943 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.34□□□□□ -0.75
GABRA1-202ENST00000393943 GNAI2P04899 355 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 ANAPC15P60006 121 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 NAT10Q9H0A0 1025 aaKnown RBP10.34□□□□□ -0.75
GABRA1-202ENST00000393943 ZBTB40Q9NUA8 1239 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 GTPBP4Q9BZE4 634 aaKnown RBP10.34□□□□□ -0.75
GABRA1-202ENST00000393943 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
GABRA1-202ENST00000393943 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
GABRA1-202ENST00000393943 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
GABRA1-202ENST00000393943 ATP10AO60312 1499 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 SLC52A1Q9NWF4 448 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 H3BQV1 296 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
GABRA1-202ENST00000393943 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 ADGRL1O94910 1474 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 CAVIN2O95810 425 aa10.33□□□□□ -0.76
GABRA1-202ENST00000393943 PTPRCP08575 1304 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
GABRA1-202ENST00000393943 ANKRD1Q15327 319 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 CCDC112Q8NEF3 446 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 RLBP1P12271 317 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 C14orf93Q9H972 538 aaKnown RBP10.32□□□□□ -0.76
GABRA1-202ENST00000393943 PLCH2O75038 1416 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 ABCC10Q5T3U5 1492 aa10.32□□□□□ -0.76
GABRA1-202ENST00000393943 CCDC94Q9BW85 323 aaPredicted RBP10.32□□□□□ -0.76
GABRA1-202ENST00000393943 NEMFO60524 1076 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 KRT85P78386 507 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 GOLGA6L1Q8N7Z2 621 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 WDR7Q9Y4E6 1490 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 INTS4Q96HW7 963 aaKnown RBP10.31□□□□□ -0.76
GABRA1-202ENST00000393943 C1orf115Q9H7X2 142 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 ZFYVE9O95405 1425 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 BICD2Q8TD16 824 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 SPINK5Q9NQ38 1064 aaPredicted RBP10.31□□□□□ -0.76
GABRA1-202ENST00000393943 PODXL2Q9NZ53 605 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 CGNQ9P2M7 1197 aaKnown RBP10.31□□□□□ -0.76
GABRA1-202ENST00000393943 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 PLXNC1O60486 1568 aa10.31□□□□□ -0.76
GABRA1-202ENST00000393943 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
GABRA1-202ENST00000393943 VPS37CA5D8V6 355 aaPredicted RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 CCDC30Q5VVM6 783 aa10.3□□□□□ -0.76
GABRA1-202ENST00000393943 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
GABRA1-202ENST00000393943 TRIM5Q9C035 493 aa10.3□□□□□ -0.76
GABRA1-202ENST00000393943 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 TMEM132EQ6IEE7 984 aa10.3□□□□□ -0.76
GABRA1-202ENST00000393943 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
GABRA1-202ENST00000393943 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
GABRA1-202ENST00000393943 ADGRF5Q8IZF2 1346 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
GABRA1-202ENST00000393943 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 HMOX1P09601 288 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 ERC1Q8IUD2 1116 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 GAS2L2Q8NHY3 880 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 TSPYL4Q9UJ04 414 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
GABRA1-202ENST00000393943 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 UBE2HP62256 183 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 FOXD4L6Q3SYB3 417 aaPredicted RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 FOXD4L3Q6VB84 417 aaPredicted RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 LRRFIP1Q32MZ4 808 aaKnown RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 LRRIQ1Q96JM4 1722 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 USP19O94966 1318 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 IFIT2P09913 472 aaKnown RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 KIF20AO95235 890 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 MAP3K11Q16584 847 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 NUP62CLQ9H1M0 184 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 NAP1L2Q9ULW6 460 aaPredicted RBP10.28□□□□□ -0.76
GABRA1-202ENST00000393943 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
GABRA1-202ENST00000393943 NOS1P29475 1434 aa10.27□□□□□ -0.76
GABRA1-202ENST00000393943 FIBPO43427 364 aa10.27□□□□□ -0.77
GABRA1-202ENST00000393943 GNL2Q13823 731 aaKnown RBP10.27□□□□□ -0.77
GABRA1-202ENST00000393943 FEZ1Q99689 392 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms