RNA–Protein interactions for RNA: ENST00000391983.7

CAPN10-206, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,320 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-206ENST00000391983 ACEP12821 1306 aa28.28■■■□□ 2.12
CAPN10-206ENST00000391983 PLEKHG3A1L390 1219 aa28.28■■■□□ 2.12
CAPN10-206ENST00000391983 MYH16Q9H6N6 1097 aa28.27■■■□□ 2.12
CAPN10-206ENST00000391983 NRKQ7Z2Y5 1582 aa28.27■■■□□ 2.12
CAPN10-206ENST00000391983 COG3Q96JB2 828 aa28.26■■■□□ 2.12
CAPN10-206ENST00000391983 DNAJC5Q9H3Z4 198 aa28.26■■■□□ 2.12
CAPN10-206ENST00000391983 AATKQ6ZMQ8 1374 aa28.26■■■□□ 2.11
CAPN10-206ENST00000391983 TMPOP42166 694 aaKnown RBP28.25■■■□□ 2.11
CAPN10-206ENST00000391983 FAM43AQ8N2R8 423 aa28.25■■■□□ 2.11
CAPN10-206ENST00000391983 TBC1D2Q9BYX2 928 aa28.25■■■□□ 2.11
CAPN10-206ENST00000391983 KCNA6P17658 529 aa28.24■■■□□ 2.11
CAPN10-206ENST00000391983 TTC21BQ7Z4L5 1316 aa28.23■■■□□ 2.11
CAPN10-206ENST00000391983 MVPQ14764 893 aaKnown RBP28.23■■■□□ 2.11
CAPN10-206ENST00000391983 ZNF142P52746 1687 aaPredicted RBP28.22■■■□□ 2.11
CAPN10-206ENST00000391983 USP6P35125 1406 aa28.22■■■□□ 2.11
CAPN10-206ENST00000391983 PRKCSHP14314 528 aaPredicted RBP28.21■■■□□ 2.11
CAPN10-206ENST00000391983 TRIM35Q9UPQ4 493 aa28.21■■■□□ 2.11
CAPN10-206ENST00000391983 CDK12Q9NYV4 1490 aaPredicted RBP28.21■■■□□ 2.11
CAPN10-206ENST00000391983 RRS1Q15050 365 aaKnown RBP28.21■■■□□ 2.11
CAPN10-206ENST00000391983 LRRC7Q96NW7 1537 aa28.21■■■□□ 2.11
CAPN10-206ENST00000391983 ZKSCAN2Q63HK3 967 aa28.2■■■□□ 2.1
CAPN10-206ENST00000391983 RGPD8O14715 1765 aaPredicted RBP28.2■■■□□ 2.1
CAPN10-206ENST00000391983 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
CAPN10-206ENST00000391983 FCHSD2O94868 740 aa28.19■■■□□ 2.1
CAPN10-206ENST00000391983 RSPH6AQ9H0K4 717 aa28.19■■■□□ 2.1
CAPN10-206ENST00000391983 IL13P35225 146 aa28.18■■■□□ 2.1
CAPN10-206ENST00000391983 ANKLE2Q86XL3 938 aa28.18■■■□□ 2.1
CAPN10-206ENST00000391983 DZIP1LQ8IYY4 767 aaKnown RBP28.18■■■□□ 2.1
CAPN10-206ENST00000391983 SSH2Q76I76 1423 aa28.17■■■□□ 2.1
CAPN10-206ENST00000391983 L1TD1Q5T7N2 865 aaKnown RBP28.16■■■□□ 2.1
CAPN10-206ENST00000391983 FTSJ3Q8IY81 847 aaKnown RBP28.16■■■□□ 2.1
CAPN10-206ENST00000391983 OVOS2A0A0J9YW53 1432 aa28.16■■■□□ 2.1
CAPN10-206ENST00000391983 OVOS2Q6IE36 1432 aa28.16■■■□□ 2.1
CAPN10-206ENST00000391983 CT47B1P0C2W7 299 aaPredicted RBP28.15■■■□□ 2.1
CAPN10-206ENST00000391983 SETD1BQ9UPS6 1966 aaKnown RBP28.15■■■□□ 2.1
CAPN10-206ENST00000391983 PRKAR2BP31323 418 aa28.15■■■□□ 2.1
CAPN10-206ENST00000391983 PNNQ9H307 717 aaKnown RBP28.15■■■□□ 2.1
CAPN10-206ENST00000391983 HMOX1P09601 288 aa28.14■■■□□ 2.09
CAPN10-206ENST00000391983 RIPK4P57078 832 aa28.14■■■□□ 2.09
CAPN10-206ENST00000391983 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
CAPN10-206ENST00000391983 TSR2Q969E8 191 aaKnown RBP28.1■■■□□ 2.09
CAPN10-206ENST00000391983 PHACTR3Q96KR7 559 aa28.1■■■□□ 2.09
CAPN10-206ENST00000391983 NALCNQ8IZF0 1738 aa28.1■■■□□ 2.09
CAPN10-206ENST00000391983 C22orf23Q9BZE7 217 aa28.09■■■□□ 2.09
CAPN10-206ENST00000391983 SMC4Q9NTJ3 1288 aa28.09■■■□□ 2.09
CAPN10-206ENST00000391983 HDAC1Q13547 482 aaPredicted RBP28.09■■■□□ 2.09
CAPN10-206ENST00000391983 EXOSC9Q06265 439 aaKnown RBP28.08■■■□□ 2.09
CAPN10-206ENST00000391983 SPRYD3Q8NCJ5 442 aa28.08■■■□□ 2.09
CAPN10-206ENST00000391983 NGDNQ8NEJ9 315 aaKnown RBP28.07■■■□□ 2.08
CAPN10-206ENST00000391983 FMN2Q9NZ56 1722 aa28.07■■■□□ 2.08
CAPN10-206ENST00000391983 TRIM27P14373 513 aa28.07■■■□□ 2.08
CAPN10-206ENST00000391983 ANKARQ7Z5J8 1434 aa28.07■■■□□ 2.08
CAPN10-206ENST00000391983 USP31Q70CQ4 1352 aa28.06■■■□□ 2.08
CAPN10-206ENST00000391983 MCM4P33991 863 aa28.06■■■□□ 2.08
CAPN10-206ENST00000391983 MFAP1P55081 439 aaKnown RBP28.06■■■□□ 2.08
CAPN10-206ENST00000391983 IL16Q14005 1332 aa28.05■■■□□ 2.08
CAPN10-206ENST00000391983 TTC21AQ8NDW8 1320 aa28.05■■■□□ 2.08
CAPN10-206ENST00000391983 DDX19BQ9UMR2 479 aa28.05■■■□□ 2.08
CAPN10-206ENST00000391983 SSH1Q8WYL5 1049 aa28.04■■■□□ 2.08
CAPN10-206ENST00000391983 PEAK1Q9H792 1746 aa28.04■■■□□ 2.08
CAPN10-206ENST00000391983 ITPRIPQ8IWB1 547 aa28.03■■■□□ 2.08
CAPN10-206ENST00000391983 RBM33Q96EV2 1170 aaKnown RBP28.03■■■□□ 2.08
CAPN10-206ENST00000391983 CHMP5Q9NZZ3 219 aa28.03■■■□□ 2.08
CAPN10-206ENST00000391983 NFE2L2Q16236 605 aa28.02■■■□□ 2.08
CAPN10-206ENST00000391983 ATF7IPQ6VMQ6 1270 aa28.02■■■□□ 2.08
CAPN10-206ENST00000391983 EIF4A2Q14240 407 aaKnown RBP28.01■■■□□ 2.07
CAPN10-206ENST00000391983 SOX12O15370 315 aa28.01■■■□□ 2.07
CAPN10-206ENST00000391983 PIK3C2AO00443 1686 aa28■■■□□ 2.07
CAPN10-206ENST00000391983 SMC5Q8IY18 1101 aa28■■■□□ 2.07
CAPN10-206ENST00000391983 FSD2A1L4K1 749 aa27.99■■■□□ 2.07
CAPN10-206ENST00000391983 GOLGA6L3A6NEY3 463 aa27.99■■■□□ 2.07
CAPN10-206ENST00000391983 NOB1Q9ULX3 412 aaKnown RBP27.99■■■□□ 2.07
CAPN10-206ENST00000391983 NPHP4O75161 1426 aaPredicted RBP27.99■■■□□ 2.07
CAPN10-206ENST00000391983 HSP90AB2PQ58FF8 381 aa27.98■■■□□ 2.07
CAPN10-206ENST00000391983 EIF5BO60841 1220 aaKnown RBP27.98■■■□□ 2.07
CAPN10-206ENST00000391983 RRAGDQ9NQL2 400 aaPredicted RBP27.98■■■□□ 2.07
CAPN10-206ENST00000391983 XRCC6P12956 609 aaKnown RBP eCLIP27.97■■■□□ 2.07
CAPN10-206ENST00000391983 TMEM57Q8N5G2 664 aa27.96■■■□□ 2.07
CAPN10-206ENST00000391983 AEBP1Q8IUX7 1158 aa27.96■■■□□ 2.07
CAPN10-206ENST00000391983 THUMPD2Q9BTF0 503 aaKnown RBP27.96■■■□□ 2.07
CAPN10-206ENST00000391983 MAP3K19Q56UN5 1328 aa27.95■■■□□ 2.07
CAPN10-206ENST00000391983 DLG5Q8TDM6 1919 aa27.95■■■□□ 2.06
CAPN10-206ENST00000391983 HSCBQ8IWL3 235 aa27.95■■■□□ 2.06
CAPN10-206ENST00000391983 ZBTB40Q9NUA8 1239 aa27.95■■■□□ 2.06
CAPN10-206ENST00000391983 GZF1Q9H116 711 aaPredicted RBP27.93■■■□□ 2.06
CAPN10-206ENST00000391983 TRAK2O60296 914 aa27.92■■■□□ 2.06
CAPN10-206ENST00000391983 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
CAPN10-206ENST00000391983 ARXQ96QS3 562 aa27.92■■■□□ 2.06
CAPN10-206ENST00000391983 RGPD1P0DJD0 1748 aa27.92■■■□□ 2.06
CAPN10-206ENST00000391983 MARF1Q9Y4F3 1742 aaKnown RBP27.91■■■□□ 2.06
CAPN10-206ENST00000391983 IPO8O15397 1037 aaKnown RBP27.91■■■□□ 2.06
CAPN10-206ENST00000391983 KIF16BQ96L93 1317 aa27.9■■■□□ 2.06
CAPN10-206ENST00000391983 ADGRL3Q9HAR2 1447 aa27.9■■■□□ 2.06
CAPN10-206ENST00000391983 NLRP6P59044 892 aa27.9■■■□□ 2.06
CAPN10-206ENST00000391983 NUCB1Q02818 461 aa27.9■■■□□ 2.06
CAPN10-206ENST00000391983 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
CAPN10-206ENST00000391983 NUTM2GQ5VZR2 741 aa27.89■■■□□ 2.05
CAPN10-206ENST00000391983 RBM25P49756 843 aaKnown RBP27.88■■■□□ 2.05
CAPN10-206ENST00000391983 SBNO1A3KN83 1393 aa27.88■■■□□ 2.05
CAPN10-206ENST00000391983 NCOA3Q9Y6Q9 1424 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 533.8 ms