RNA–Protein interactions for RNA: ENST00000384425.1

RNU1-46P-201, Transcript of RNA, U1 small nuclear 46, pseudogene, humanhuman

BASIC

Gene RNU1-46P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-46P-201ENST00000384425 MST1RQ04912 1400 aa8.59□□□□□ -1.03
RNU1-46P-201ENST00000384425 ARHGEF10O15013 1369 aa8.59□□□□□ -1.03
RNU1-46P-201ENST00000384425 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 IL16Q14005 1332 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 NPHP3Q7Z494 1330 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 HMOX1P09601 288 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 RIPK4P57078 832 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 EIF4A2Q14240 407 aaKnown RBP8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 NUTM2GQ5VZR2 741 aa8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 TRMT2AQ8IZ69 625 aaKnown RBP8.58□□□□□ -1.04
RNU1-46P-201ENST00000384425 CT47B1P0C2W7 299 aaPredicted RBP8.57□□□□□ -1.04
RNU1-46P-201ENST00000384425 HSP90AB2PQ58FF8 381 aa8.57□□□□□ -1.04
RNU1-46P-201ENST00000384425 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
RNU1-46P-201ENST00000384425 STRCP1A6NGW2 1772 aa8.57□□□□□ -1.04
RNU1-46P-201ENST00000384425 ZNF335Q9H4Z2 1342 aaPredicted RBP8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 PEAK1Q9H792 1746 aa8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 HOXC9P31274 260 aa8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 IP6K1Q92551 441 aa8.55□□□□□ -1.04
RNU1-46P-201ENST00000384425 USP19O94966 1318 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 GNAI1P63096 354 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 SLIT3O75094 1523 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 NFAT5O94916 1531 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
RNU1-46P-201ENST00000384425 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 GCP02774 474 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 MARF1Q9Y4F3 1742 aaKnown RBP8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 TNS3Q68CZ2 1445 aa8.53□□□□□ -1.04
RNU1-46P-201ENST00000384425 RGPD1P0DJD0 1748 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 KDRP35968 1356 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 EYA1Q99502 592 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 FANCIQ9NVI1 1328 aa8.52□□□□□ -1.05
RNU1-46P-201ENST00000384425 PHRF1Q9P1Y6 1649 aaKnown RBP8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 MS4A1P11836 297 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 BRINP3Q76B58 766 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 ARHGEF25Q86VW2 580 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 CCDC136Q96JN2 1154 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 SPATA31A3Q5VYP0 1347 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 PXDNQ92626 1479 aa8.51□□□□□ -1.05
RNU1-46P-201ENST00000384425 LTN1O94822 1766 aa8.5□□□□□ -1.05
RNU1-46P-201ENST00000384425 ALS2Q96Q42 1657 aa8.5□□□□□ -1.05
RNU1-46P-201ENST00000384425 XIRP1Q702N8 1843 aaKnown RBP8.5□□□□□ -1.05
RNU1-46P-201ENST00000384425 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
RNU1-46P-201ENST00000384425 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
RNU1-46P-201ENST00000384425 PLIN1O60240 522 aa8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 RARSP54136 660 aaKnown RBP8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 EXOSC9Q06265 439 aaKnown RBP8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 CFAP44Q96MT7 982 aa8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 ABCC6O95255 1503 aa8.49□□□□□ -1.05
RNU1-46P-201ENST00000384425 MED1Q15648 1581 aaPredicted RBP8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 EXOC6Q8TAG9 804 aa8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 ANKRD24Q8TF21 1146 aa8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 SMC4Q9NTJ3 1288 aa8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 KIF16BQ96L93 1317 aa8.48□□□□□ -1.05
RNU1-46P-201ENST00000384425 GNAT3A8MTJ3 354 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 IPO8O15397 1037 aaKnown RBP8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 BCAR3O75815 825 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 AAMPQ13685 434 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 CPDO75976 1380 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
RNU1-46P-201ENST00000384425 CSB-PGBD3P0DP91 1061 aa8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 NBPF6Q5VWK0 638 aa8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 ZKSCAN2Q63HK3 967 aa8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 NBPF4Q96M43 638 aa8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 MBIPQ9NS73 344 aa8.46□□□□□ -1.06
RNU1-46P-201ENST00000384425 FAM83GA6ND36 823 aa8.45□□□□□ -1.06
RNU1-46P-201ENST00000384425 CHL1O00533 1208 aa8.45□□□□□ -1.06
RNU1-46P-201ENST00000384425 MCM10Q7L590 875 aa8.45□□□□□ -1.06
RNU1-46P-201ENST00000384425 FTSJ3Q8IY81 847 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms