RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 GNAI1P63096 354 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 ARFGAP2Q8N6H7 521 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 RABGAP1Q9Y3P9 1069 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
VLDLR-203ENST00000382100 TAF4BQ92750 862 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 CETN1Q12798 172 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
VLDLR-203ENST00000382100 TIGD1Q96MW7 591 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
VLDLR-203ENST00000382100 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
VLDLR-203ENST00000382100 ZFYP08048 801 aaPredicted RBP11.59□□□□□ -0.55
VLDLR-203ENST00000382100 HSPA4P34932 840 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 ESPNB1AK53 854 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
VLDLR-203ENST00000382100 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
VLDLR-203ENST00000382100 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
VLDLR-203ENST00000382100 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
VLDLR-203ENST00000382100 GCC1Q96CN9 775 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
VLDLR-203ENST00000382100 KIF4AO95239 1232 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 CDK5RAP3Q96JB5 506 aa11.58□□□□□ -0.56
VLDLR-203ENST00000382100 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 RNF168Q8IYW5 571 aaPredicted RBP11.57□□□□□ -0.56
VLDLR-203ENST00000382100 ALS2CR12Q96Q35 445 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
VLDLR-203ENST00000382100 SEC62Q99442 399 aaKnown RBP11.57□□□□□ -0.56
VLDLR-203ENST00000382100 USP37Q86T82 979 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 CNTROBQ8N137 903 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 PPFIBP2Q8ND30 876 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 KIF21BO75037 1637 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 STMN1P16949 149 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 ZHX1Q9UKY1 873 aaPredicted RBP11.57□□□□□ -0.56
VLDLR-203ENST00000382100 FRAT2O75474 233 aaPredicted RBP11.57□□□□□ -0.56
VLDLR-203ENST00000382100 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
VLDLR-203ENST00000382100 PATL2C9JE40 543 aaKnown RBP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 C22orf23Q9BZE7 217 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 FERP16591 822 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 NOL7Q9UMY1 257 aaKnown RBP11.56□□□□□ -0.56
VLDLR-203ENST00000382100 PLCD4Q9BRC7 762 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
VLDLR-203ENST00000382100 TACC1O75410 805 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
VLDLR-203ENST00000382100 AK9Q5TCS8 1911 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 TRAF1Q13077 416 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 STIM2Q9P246 746 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 EFCAB2Q5VUJ9 269 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 NACAP1Q9BZK3 213 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 ICE1Q9Y2F5 2266 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 BMP15O95972 392 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC94Q9BW85 323 aaPredicted RBP11.55□□□□□ -0.56
VLDLR-203ENST00000382100 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 PPFIA2O75334 1257 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 MAP7Q14244 749 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC14Q49A88 953 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 OPA1O60313 960 aa11.55□□□□□ -0.56
VLDLR-203ENST00000382100 SPATS2Q86XZ4 545 aaKnown RBP11.55□□□□□ -0.56
VLDLR-203ENST00000382100 PPP1R1BQ9UD71 204 aaPredicted RBP11.55□□□□□ -0.56
VLDLR-203ENST00000382100 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 CKAP4Q07065 602 aaKnown RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 BCAP29Q9UHQ4 241 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 LIG1P18858 919 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 GABPB2Q8TAK5 448 aaPredicted RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 ALDH3A1P30838 453 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 IFT74Q96LB3 600 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
VLDLR-203ENST00000382100 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
VLDLR-203ENST00000382100 NUP155O75694 1391 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms