RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FBLN1P23142 703 aa11.39□□□□□ -0.59
GPNMB-202ENST00000381990 L1TD1Q5T7N2 865 aaKnown RBP11.38□□□□□ -0.59
GPNMB-202ENST00000381990 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
GPNMB-202ENST00000381990 FCHSD2O94868 740 aa11.38□□□□□ -0.59
GPNMB-202ENST00000381990 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
GPNMB-202ENST00000381990 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
GPNMB-202ENST00000381990 RGPD8O14715 1765 aaPredicted RBP11.37□□□□□ -0.59
GPNMB-202ENST00000381990 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
GPNMB-202ENST00000381990 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
GPNMB-202ENST00000381990 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
GPNMB-202ENST00000381990 USP19O94966 1318 aa11.37□□□□□ -0.59
GPNMB-202ENST00000381990 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
GPNMB-202ENST00000381990 NPHP4O75161 1426 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-202ENST00000381990 LRRC7Q96NW7 1537 aa11.36□□□□□ -0.59
GPNMB-202ENST00000381990 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
GPNMB-202ENST00000381990 IL13P35225 146 aa11.35□□□□□ -0.59
GPNMB-202ENST00000381990 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
GPNMB-202ENST00000381990 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
GPNMB-202ENST00000381990 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
GPNMB-202ENST00000381990 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
GPNMB-202ENST00000381990 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
GPNMB-202ENST00000381990 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
GPNMB-202ENST00000381990 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
GPNMB-202ENST00000381990 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.59
GPNMB-202ENST00000381990 IL16Q14005 1332 aa11.33□□□□□ -0.6
GPNMB-202ENST00000381990 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
GPNMB-202ENST00000381990 PRKAR2BP31323 418 aa11.33□□□□□ -0.6
GPNMB-202ENST00000381990 IGHDP01880 384 aa11.33□□□□□ -0.6
GPNMB-202ENST00000381990 RIPK4P57078 832 aa11.33□□□□□ -0.6
GPNMB-202ENST00000381990 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
GPNMB-202ENST00000381990 BCAR3O75815 825 aa11.32□□□□□ -0.6
GPNMB-202ENST00000381990 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
GPNMB-202ENST00000381990 HMOX1P09601 288 aa11.31□□□□□ -0.6
GPNMB-202ENST00000381990 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
GPNMB-202ENST00000381990 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
GPNMB-202ENST00000381990 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
GPNMB-202ENST00000381990 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
GPNMB-202ENST00000381990 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
GPNMB-202ENST00000381990 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
GPNMB-202ENST00000381990 TBC1D32Q96NH3 1257 aa11.3□□□□□ -0.6
GPNMB-202ENST00000381990 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
GPNMB-202ENST00000381990 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
GPNMB-202ENST00000381990 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
GPNMB-202ENST00000381990 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
GPNMB-202ENST00000381990 USP54Q70EL1 1684 aa11.29□□□□□ -0.6
GPNMB-202ENST00000381990 SEC24BO95487 1268 aa11.28□□□□□ -0.6
GPNMB-202ENST00000381990 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
GPNMB-202ENST00000381990 MAP3K19Q56UN5 1328 aa11.27□□□□□ -0.6
GPNMB-202ENST00000381990 SBNO1A3KN83 1393 aa11.27□□□□□ -0.6
GPNMB-202ENST00000381990 NLRP6P59044 892 aa11.27□□□□□ -0.61
GPNMB-202ENST00000381990 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
GPNMB-202ENST00000381990 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.61
GPNMB-202ENST00000381990 SLKQ9H2G2 1235 aaPredicted RBP11.27□□□□□ -0.61
GPNMB-202ENST00000381990 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
GPNMB-202ENST00000381990 FLT4P35916 1363 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
GPNMB-202ENST00000381990 LMOD3Q0VAK6 560 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 COG6Q9Y2V7 657 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
GPNMB-202ENST00000381990 GOLGA6L3A6NEY3 463 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 SOX12O15370 315 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
GPNMB-202ENST00000381990 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 RWDD1Q9H446 243 aaPredicted RBP11.25□□□□□ -0.61
GPNMB-202ENST00000381990 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
GPNMB-202ENST00000381990 KIF24Q5T7B8 1368 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 ABTB2Q8N961 1025 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 PANK1Q8TE04 598 aa11.25□□□□□ -0.61
GPNMB-202ENST00000381990 ARHGEF10O15013 1369 aa11.24□□□□□ -0.61
GPNMB-202ENST00000381990 AMPHP49418 695 aa11.24□□□□□ -0.61
GPNMB-202ENST00000381990 ESCO1Q5FWF5 840 aa11.24□□□□□ -0.61
GPNMB-202ENST00000381990 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
GPNMB-202ENST00000381990 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
GPNMB-202ENST00000381990 RRAGDQ9NQL2 400 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-202ENST00000381990 MCM4P33991 863 aa11.23□□□□□ -0.61
GPNMB-202ENST00000381990 GNAI1P63096 354 aa11.23□□□□□ -0.61
GPNMB-202ENST00000381990 IFT57Q9NWB7 429 aa11.23□□□□□ -0.61
GPNMB-202ENST00000381990 CLCN1P35523 988 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 PSME1Q06323 249 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 GLIPR1L2Q4G1C9 344 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 NUTM2GQ5VZR2 741 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 CHMP5Q9NZZ3 219 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
GPNMB-202ENST00000381990 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
GPNMB-202ENST00000381990 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
GPNMB-202ENST00000381990 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
GPNMB-202ENST00000381990 MRE11P49959 708 aa11.21□□□□□ -0.61
GPNMB-202ENST00000381990 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
GPNMB-202ENST00000381990 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
GPNMB-202ENST00000381990 KDRP35968 1356 aa11.21□□□□□ -0.62
GPNMB-202ENST00000381990 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.62
GPNMB-202ENST00000381990 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.62
GPNMB-202ENST00000381990 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.62
GPNMB-202ENST00000381990 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms