RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
TDP2-202ENST00000378198 PTCH1Q13635 1447 aa22.93■■□□□ 1.26
TDP2-202ENST00000378198 PIK3R4Q99570 1358 aa22.92■■□□□ 1.26
TDP2-202ENST00000378198 NME9Q86XW9 330 aa22.92■■□□□ 1.26
TDP2-202ENST00000378198 MRPL50Q8N5N7 158 aaKnown RBP22.92■■□□□ 1.26
TDP2-202ENST00000378198 C3P01024 1663 aa22.92■■□□□ 1.26
TDP2-202ENST00000378198 LMOD3Q0VAK6 560 aa22.91■■□□□ 1.26
TDP2-202ENST00000378198 METP08581 1390 aa22.91■■□□□ 1.26
TDP2-202ENST00000378198 ZNF853P0CG23 659 aa22.91■■□□□ 1.26
TDP2-202ENST00000378198 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
TDP2-202ENST00000378198 TECPR2O15040 1411 aa22.9■■□□□ 1.26
TDP2-202ENST00000378198 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
TDP2-202ENST00000378198 COG3Q96JB2 828 aa22.9■■□□□ 1.26
TDP2-202ENST00000378198 CPS1P31327 1500 aa22.9■■□□□ 1.26
TDP2-202ENST00000378198 ZBTB7BO15156 539 aaPredicted RBP22.89■■□□□ 1.26
TDP2-202ENST00000378198 HDGFP51858 240 aaKnown RBP22.89■■□□□ 1.26
TDP2-202ENST00000378198 CCDC61Q9Y6R9 512 aa22.89■■□□□ 1.25
TDP2-202ENST00000378198 MLECQ14165 292 aa22.88■■□□□ 1.25
TDP2-202ENST00000378198 CHD1LQ86WJ1 897 aa22.88■■□□□ 1.25
TDP2-202ENST00000378198 GCC1Q96CN9 775 aa22.88■■□□□ 1.25
TDP2-202ENST00000378198 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
TDP2-202ENST00000378198 TXNDC2Q86VQ3 553 aa22.87■■□□□ 1.25
TDP2-202ENST00000378198 MBIPQ9NS73 344 aa22.87■■□□□ 1.25
TDP2-202ENST00000378198 CFAP44Q96MT7 982 aa22.86■■□□□ 1.25
TDP2-202ENST00000378198 ZNF692Q9BU19 519 aaPredicted RBP22.86■■□□□ 1.25
TDP2-202ENST00000378198 TSPYL6Q8N831 410 aa22.86■■□□□ 1.25
TDP2-202ENST00000378198 ZRANB1Q9UGI0 708 aa22.86■■□□□ 1.25
TDP2-202ENST00000378198 LNPKQ9C0E8 428 aa22.85■■□□□ 1.25
TDP2-202ENST00000378198 ABCC4O15439 1325 aa22.85■■□□□ 1.25
TDP2-202ENST00000378198 NRKQ7Z2Y5 1582 aa22.85■■□□□ 1.25
TDP2-202ENST00000378198 TWISTNBQ3B726 338 aaPredicted RBP22.84■■□□□ 1.25
TDP2-202ENST00000378198 ESF1Q9H501 851 aaKnown RBP22.83■■□□□ 1.25
TDP2-202ENST00000378198 BRPF3Q9ULD4 1205 aa22.83■■□□□ 1.25
TDP2-202ENST00000378198 RBM25P49756 843 aaKnown RBP22.82■■□□□ 1.24
TDP2-202ENST00000378198 BMP2KLQ5H9B9 411 aa22.82■■□□□ 1.24
TDP2-202ENST00000378198 API5Q9BZZ5 524 aaKnown RBP22.81■■□□□ 1.24
TDP2-202ENST00000378198 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
TDP2-202ENST00000378198 CHMP5Q9NZZ3 219 aa22.8■■□□□ 1.24
TDP2-202ENST00000378198 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
TDP2-202ENST00000378198 KIF24Q5T7B8 1368 aa22.8■■□□□ 1.24
TDP2-202ENST00000378198 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
TDP2-202ENST00000378198 ANKRD45Q5TZF3 282 aa22.8■■□□□ 1.24
TDP2-202ENST00000378198 HSCBQ8IWL3 235 aa22.8■■□□□ 1.24
TDP2-202ENST00000378198 NCKAP5LQ9HCH0 1330 aa22.79■■□□□ 1.24
TDP2-202ENST00000378198 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
TDP2-202ENST00000378198 TOPAZ1Q8N9V7 1692 aa22.78■■□□□ 1.24
TDP2-202ENST00000378198 PRR36Q9H6K5 1346 aa22.77■■□□□ 1.24
TDP2-202ENST00000378198 SPRYD3Q8NCJ5 442 aa22.77■■□□□ 1.23
TDP2-202ENST00000378198 SNX21Q969T3 373 aa22.77■■□□□ 1.23
TDP2-202ENST00000378198 TNRQ92752 1358 aa22.76■■□□□ 1.23
TDP2-202ENST00000378198 C1orf115Q9H7X2 142 aa22.76■■□□□ 1.23
TDP2-202ENST00000378198 HAP1P54257 671 aaPredicted RBP22.75■■□□□ 1.23
TDP2-202ENST00000378198 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
TDP2-202ENST00000378198 FAM83GA6ND36 823 aa22.75■■□□□ 1.23
TDP2-202ENST00000378198 SIRT2Q8IXJ6 389 aa22.75■■□□□ 1.23
TDP2-202ENST00000378198 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
TDP2-202ENST00000378198 TMEM2Q9UHN6 1383 aa22.75■■□□□ 1.23
TDP2-202ENST00000378198 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
TDP2-202ENST00000378198 MCM4P33991 863 aa22.74■■□□□ 1.23
TDP2-202ENST00000378198 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
TDP2-202ENST00000378198 NCOA3Q9Y6Q9 1424 aa22.73■■□□□ 1.23
TDP2-202ENST00000378198 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
TDP2-202ENST00000378198 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
TDP2-202ENST00000378198 EIF4A2Q14240 407 aaKnown RBP22.72■■□□□ 1.23
TDP2-202ENST00000378198 L1TD1Q5T7N2 865 aaKnown RBP22.72■■□□□ 1.23
TDP2-202ENST00000378198 RGPD1P0DJD0 1748 aa22.71■■□□□ 1.23
TDP2-202ENST00000378198 DCTN1Q14203 1278 aa22.71■■□□□ 1.23
TDP2-202ENST00000378198 OVOS2A0A0J9YW53 1432 aa22.71■■□□□ 1.23
TDP2-202ENST00000378198 OVOS2Q6IE36 1432 aa22.71■■□□□ 1.23
TDP2-202ENST00000378198 ADAMTS13Q76LX8 1427 aa22.71■■□□□ 1.23
TDP2-202ENST00000378198 INTS3Q68E01 1043 aaKnown RBP22.7■■□□□ 1.22
TDP2-202ENST00000378198 SULT6B1Q6IMI4 303 aa22.7■■□□□ 1.22
TDP2-202ENST00000378198 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
TDP2-202ENST00000378198 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
TDP2-202ENST00000378198 PEAK1Q9H792 1746 aa22.69■■□□□ 1.22
TDP2-202ENST00000378198 KIAA0232Q92628 1395 aa22.68■■□□□ 1.22
TDP2-202ENST00000378198 ACEP12821 1306 aa22.68■■□□□ 1.22
TDP2-202ENST00000378198 CHL1O00533 1208 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 AEBP1Q8IUX7 1158 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 USP6P35125 1406 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 DDIT3P35638 169 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 TBC1D9Q6ZT07 1266 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 DCTPP1Q9H773 170 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 FMN2Q9NZ56 1722 aa22.67■■□□□ 1.22
TDP2-202ENST00000378198 PLEKHG1Q9ULL1 1385 aa22.66■■□□□ 1.22
TDP2-202ENST00000378198 USP31Q70CQ4 1352 aa22.65■■□□□ 1.22
TDP2-202ENST00000378198 CIZ1Q9ULV3 898 aaPredicted RBP22.65■■□□□ 1.22
TDP2-202ENST00000378198 CDC45O75419 566 aa22.64■■□□□ 1.22
TDP2-202ENST00000378198 KIF2CQ99661 725 aa22.64■■□□□ 1.22
TDP2-202ENST00000378198 PTPRCP08575 1304 aa22.63■■□□□ 1.21
TDP2-202ENST00000378198 DDX11L8A8MPP1 907 aa22.63■■□□□ 1.21
TDP2-202ENST00000378198 RPAP2Q8IXW5 612 aaPredicted RBP22.63■■□□□ 1.21
TDP2-202ENST00000378198 RGS12O14924 1447 aa22.63■■□□□ 1.21
TDP2-202ENST00000378198 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
TDP2-202ENST00000378198 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
TDP2-202ENST00000378198 PLEKHM2Q8IWE5 1019 aa22.62■■□□□ 1.21
TDP2-202ENST00000378198 TRAK2O60296 914 aa22.61■■□□□ 1.21
TDP2-202ENST00000378198 MCM10Q7L590 875 aa22.61■■□□□ 1.21
TDP2-202ENST00000378198 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
TDP2-202ENST00000378198 ATP10DQ9P241 1426 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms