RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 DCTN1Q14203 1278 aa24.6■■□□□ 1.53
PCDHA4-201ENST00000378125 AEBP1Q8IUX7 1158 aa24.6■■□□□ 1.53
PCDHA4-201ENST00000378125 THEMISQ8N1K5 641 aaPredicted RBP24.6■■□□□ 1.53
PCDHA4-201ENST00000378125 PLEKHG3A1L390 1219 aa24.59■■□□□ 1.53
PCDHA4-201ENST00000378125 EIF4A2Q14240 407 aaKnown RBP24.58■■□□□ 1.53
PCDHA4-201ENST00000378125 TBX22Q9Y458 520 aa24.58■■□□□ 1.53
PCDHA4-201ENST00000378125 TSPYL6Q8N831 410 aa24.57■■□□□ 1.52
PCDHA4-201ENST00000378125 HSP90AB2PQ58FF8 381 aa24.57■■□□□ 1.52
PCDHA4-201ENST00000378125 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
PCDHA4-201ENST00000378125 TMEM57Q8N5G2 664 aa24.57■■□□□ 1.52
PCDHA4-201ENST00000378125 USP6P35125 1406 aa24.57■■□□□ 1.52
PCDHA4-201ENST00000378125 RWDD1Q9H446 243 aaPredicted RBP24.56■■□□□ 1.52
PCDHA4-201ENST00000378125 PDZRN3Q9UPQ7 1066 aa24.56■■□□□ 1.52
PCDHA4-201ENST00000378125 SLIT1O75093 1534 aa24.56■■□□□ 1.52
PCDHA4-201ENST00000378125 ARHGAP23Q9P227 1491 aa24.55■■□□□ 1.52
PCDHA4-201ENST00000378125 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
PCDHA4-201ENST00000378125 MBIPQ9NS73 344 aa24.55■■□□□ 1.52
PCDHA4-201ENST00000378125 TOPAZ1Q8N9V7 1692 aa24.54■■□□□ 1.52
PCDHA4-201ENST00000378125 AAMPQ13685 434 aa24.54■■□□□ 1.52
PCDHA4-201ENST00000378125 SLC4A3P48751 1232 aa24.53■■□□□ 1.52
PCDHA4-201ENST00000378125 NRKQ7Z2Y5 1582 aa24.53■■□□□ 1.52
PCDHA4-201ENST00000378125 KCNA6P17658 529 aa24.52■■□□□ 1.52
PCDHA4-201ENST00000378125 GNAI1P63096 354 aa24.52■■□□□ 1.52
PCDHA4-201ENST00000378125 OVOS2A0A0J9YW53 1432 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 OVOS2Q6IE36 1432 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 VAMP4O75379 141 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 DDX19BQ9UMR2 479 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 KIF16BQ96L93 1317 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
PCDHA4-201ENST00000378125 CALD1Q05682 793 aaKnown RBP24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 RBM33Q96EV2 1170 aaKnown RBP24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 RGPD8O14715 1765 aaPredicted RBP24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 DLG5Q8TDM6 1919 aa24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 NUTM2GQ5VZR2 741 aa24.5■■□□□ 1.51
PCDHA4-201ENST00000378125 SEC24BO95487 1268 aa24.49■■□□□ 1.51
PCDHA4-201ENST00000378125 C8orf58Q8NAV2 365 aa24.49■■□□□ 1.51
PCDHA4-201ENST00000378125 ZNF853P0CG23 659 aa24.48■■□□□ 1.51
PCDHA4-201ENST00000378125 DDRGK1Q96HY6 314 aa24.47■■□□□ 1.51
PCDHA4-201ENST00000378125 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
PCDHA4-201ENST00000378125 DIP2AQ14689 1571 aa24.47■■□□□ 1.51
PCDHA4-201ENST00000378125 LMOD3Q0VAK6 560 aa24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 TWISTNBQ3B726 338 aaPredicted RBP24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 MCM10Q7L590 875 aa24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 PTCH1Q13635 1447 aa24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 MAP3K19Q56UN5 1328 aa24.46■■□□□ 1.51
PCDHA4-201ENST00000378125 MRPL50Q8N5N7 158 aaKnown RBP24.45■■□□□ 1.51
PCDHA4-201ENST00000378125 SSH2Q76I76 1423 aa24.44■■□□□ 1.5
PCDHA4-201ENST00000378125 ZBTB40Q9NUA8 1239 aa24.44■■□□□ 1.5
PCDHA4-201ENST00000378125 KRT24Q2M2I5 525 aa24.43■■□□□ 1.5
PCDHA4-201ENST00000378125 USP31Q70CQ4 1352 aa24.42■■□□□ 1.5
PCDHA4-201ENST00000378125 NLRP6P59044 892 aa24.41■■□□□ 1.5
PCDHA4-201ENST00000378125 AMPHP49418 695 aa24.41■■□□□ 1.5
PCDHA4-201ENST00000378125 C1orf115Q9H7X2 142 aa24.41■■□□□ 1.5
PCDHA4-201ENST00000378125 TTC21AQ8NDW8 1320 aa24.41■■□□□ 1.5
PCDHA4-201ENST00000378125 FOXO3O43524 673 aa24.4■■□□□ 1.5
PCDHA4-201ENST00000378125 NALCNQ8IZF0 1738 aa24.39■■□□□ 1.5
PCDHA4-201ENST00000378125 C14orf37Q86TY3 774 aa24.39■■□□□ 1.5
PCDHA4-201ENST00000378125 ZNF428Q96B54 188 aa24.39■■□□□ 1.5
PCDHA4-201ENST00000378125 DAXXQ9UER7 740 aaPredicted RBP24.39■■□□□ 1.5
PCDHA4-201ENST00000378125 HDAC1Q13547 482 aaPredicted RBP24.39■■□□□ 1.49
PCDHA4-201ENST00000378125 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.49
PCDHA4-201ENST00000378125 RIMS1Q86UR5 1692 aaKnown RBP24.38■■□□□ 1.49
PCDHA4-201ENST00000378125 MIS18AQ9NYP9 233 aa24.38■■□□□ 1.49
PCDHA4-201ENST00000378125 USP19O94966 1318 aa24.37■■□□□ 1.49
PCDHA4-201ENST00000378125 XRN1Q8IZH2 1706 aaKnown RBP24.37■■□□□ 1.49
PCDHA4-201ENST00000378125 BRPF1P55201 1214 aaPredicted RBP24.36■■□□□ 1.49
PCDHA4-201ENST00000378125 VIRMAQ69YN4 1812 aaKnown RBP24.35■■□□□ 1.49
PCDHA4-201ENST00000378125 ZBTB7BO15156 539 aaPredicted RBP24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 ANKLE2Q86XL3 938 aa24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 LTV1Q96GA3 475 aaPredicted RBP24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 EYA1Q99502 592 aa24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 FLT4P35916 1363 aa24.34■■□□□ 1.49
PCDHA4-201ENST00000378125 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
PCDHA4-201ENST00000378125 PIK3C2AO00443 1686 aa24.33■■□□□ 1.49
PCDHA4-201ENST00000378125 ARHGAP45Q92619 1136 aa24.32■■□□□ 1.48
PCDHA4-201ENST00000378125 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PCDHA4-201ENST00000378125 SMC5Q8IY18 1101 aa24.32■■□□□ 1.48
PCDHA4-201ENST00000378125 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
PCDHA4-201ENST00000378125 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
PCDHA4-201ENST00000378125 CHL1O00533 1208 aa24.3■■□□□ 1.48
PCDHA4-201ENST00000378125 LNPKQ9C0E8 428 aa24.3■■□□□ 1.48
PCDHA4-201ENST00000378125 FMN2Q9NZ56 1722 aa24.29■■□□□ 1.48
PCDHA4-201ENST00000378125 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
PCDHA4-201ENST00000378125 ABCC4O15439 1325 aa24.28■■□□□ 1.48
PCDHA4-201ENST00000378125 RTF1Q92541 710 aaKnown RBP24.28■■□□□ 1.48
PCDHA4-201ENST00000378125 BCL11AQ9H165 835 aa24.28■■□□□ 1.48
PCDHA4-201ENST00000378125 PIK3R4Q99570 1358 aa24.28■■□□□ 1.48
PCDHA4-201ENST00000378125 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
PCDHA4-201ENST00000378125 HOXC9P31274 260 aa24.27■■□□□ 1.48
PCDHA4-201ENST00000378125 PHF8Q9UPP1 1060 aa24.27■■□□□ 1.48
PCDHA4-201ENST00000378125 ZBTB7CA1YPR0 619 aa24.26■■□□□ 1.47
PCDHA4-201ENST00000378125 API5Q9BZZ5 524 aaKnown RBP24.26■■□□□ 1.47
PCDHA4-201ENST00000378125 IGSF1Q8N6C5 1336 aa24.25■■□□□ 1.47
PCDHA4-201ENST00000378125 NUCB1Q02818 461 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 ESCO1Q5FWF5 840 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms