RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF9-201ENST00000377507 C3P01024 1663 aa14.88□□□□□ -0.03
TNFRSF9-201ENST00000377507 HMOX1P09601 288 aa14.88□□□□□ -0.03
TNFRSF9-201ENST00000377507 MLECQ14165 292 aa14.88□□□□□ -0.03
TNFRSF9-201ENST00000377507 MRPL50Q8N5N7 158 aaKnown RBP14.88□□□□□ -0.03
TNFRSF9-201ENST00000377507 PTCH1Q13635 1447 aa14.87□□□□□ -0.03
TNFRSF9-201ENST00000377507 AKAP12Q02952 1782 aa14.87□□□□□ -0.03
TNFRSF9-201ENST00000377507 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF9-201ENST00000377507 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
TNFRSF9-201ENST00000377507 ZBTB7BO15156 539 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 NUCB1Q02818 461 aa14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 COG3Q96JB2 828 aa14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 CHMP4BQ9H444 224 aaKnown RBP14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 LMOD3Q0VAK6 560 aa14.86□□□□□ -0.03
TNFRSF9-201ENST00000377507 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
TNFRSF9-201ENST00000377507 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
TNFRSF9-201ENST00000377507 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
TNFRSF9-201ENST00000377507 TNRQ92752 1358 aa14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 TBC1D2Q9BYX2 928 aa14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 THUMPD2Q9BTF0 503 aaKnown RBP14.84□□□□□ -0.03
TNFRSF9-201ENST00000377507 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.03
TNFRSF9-201ENST00000377507 ABCC4O15439 1325 aa14.83□□□□□ -0.04
TNFRSF9-201ENST00000377507 NRKQ7Z2Y5 1582 aa14.83□□□□□ -0.04
TNFRSF9-201ENST00000377507 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.04
TNFRSF9-201ENST00000377507 ROBO2Q9HCK4 1378 aa14.83□□□□□ -0.04
TNFRSF9-201ENST00000377507 UBR1Q8IWV7 1749 aa14.82□□□□□ -0.04
TNFRSF9-201ENST00000377507 C22orf23Q9BZE7 217 aa14.82□□□□□ -0.04
TNFRSF9-201ENST00000377507 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
TNFRSF9-201ENST00000377507 CHD1LQ86WJ1 897 aa14.82□□□□□ -0.04
TNFRSF9-201ENST00000377507 GCC1Q96CN9 775 aa14.82□□□□□ -0.04
TNFRSF9-201ENST00000377507 KIF13AQ9H1H9 1805 aa14.81□□□□□ -0.04
TNFRSF9-201ENST00000377507 PLEKHG3A1L390 1219 aa14.81□□□□□ -0.04
TNFRSF9-201ENST00000377507 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
TNFRSF9-201ENST00000377507 KIF24Q5T7B8 1368 aa14.81□□□□□ -0.04
TNFRSF9-201ENST00000377507 DLG5Q8TDM6 1919 aa14.81□□□□□ -0.04
TNFRSF9-201ENST00000377507 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF9-201ENST00000377507 TOPAZ1Q8N9V7 1692 aa14.8□□□□□ -0.04
TNFRSF9-201ENST00000377507 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
TNFRSF9-201ENST00000377507 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
TNFRSF9-201ENST00000377507 C8orf58Q8NAV2 365 aa14.79□□□□□ -0.04
TNFRSF9-201ENST00000377507 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
TNFRSF9-201ENST00000377507 TTC21BQ7Z4L5 1316 aa14.79□□□□□ -0.04
TNFRSF9-201ENST00000377507 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 RBM25P49756 843 aaKnown RBP14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 BMP2KLQ5H9B9 411 aa14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 API5Q9BZZ5 524 aaKnown RBP14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 SLKQ9H2G2 1235 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF9-201ENST00000377507 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.04
TNFRSF9-201ENST00000377507 EIF4A2Q14240 407 aaKnown RBP14.77□□□□□ -0.04
TNFRSF9-201ENST00000377507 SIRT2Q8IXJ6 389 aa14.77□□□□□ -0.04
TNFRSF9-201ENST00000377507 LNPKQ9C0E8 428 aa14.77□□□□□ -0.04
TNFRSF9-201ENST00000377507 SSH2Q76I76 1423 aa14.77□□□□□ -0.05
TNFRSF9-201ENST00000377507 FAM83GA6ND36 823 aa14.76□□□□□ -0.05
TNFRSF9-201ENST00000377507 USP6P35125 1406 aa14.76□□□□□ -0.05
TNFRSF9-201ENST00000377507 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
TNFRSF9-201ENST00000377507 ACEP12821 1306 aa14.75□□□□□ -0.05
TNFRSF9-201ENST00000377507 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF9-201ENST00000377507 CHL1O00533 1208 aa14.75□□□□□ -0.05
TNFRSF9-201ENST00000377507 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
TNFRSF9-201ENST00000377507 LTKP29376 864 aa14.75□□□□□ -0.05
TNFRSF9-201ENST00000377507 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 KIAA0232Q92628 1395 aa14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 ANKRD45Q5TZF3 282 aa14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 AEBP1Q8IUX7 1158 aa14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 SNX21Q969T3 373 aa14.74□□□□□ -0.05
TNFRSF9-201ENST00000377507 DCTN1Q14203 1278 aa14.73□□□□□ -0.05
TNFRSF9-201ENST00000377507 PTPRUQ92729 1446 aa14.73□□□□□ -0.05
TNFRSF9-201ENST00000377507 PEAK1Q9H792 1746 aa14.73□□□□□ -0.05
TNFRSF9-201ENST00000377507 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
TNFRSF9-201ENST00000377507 NCOA3Q9Y6Q9 1424 aa14.72□□□□□ -0.05
TNFRSF9-201ENST00000377507 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
TNFRSF9-201ENST00000377507 RGS12O14924 1447 aa14.71□□□□□ -0.05
TNFRSF9-201ENST00000377507 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
TNFRSF9-201ENST00000377507 DDIT3P35638 169 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 HSP90AB2PQ58FF8 381 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 CHMP5Q9NZZ3 219 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 TTC21AQ8NDW8 1320 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 ARHGEF10O15013 1369 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 CRB1P82279 1406 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 ARHGAP23Q9P227 1491 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 SLIT1O75093 1534 aa14.7□□□□□ -0.06
TNFRSF9-201ENST00000377507 KIF2CQ99661 725 aa14.69□□□□□ -0.06
TNFRSF9-201ENST00000377507 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
TNFRSF9-201ENST00000377507 PTPRCP08575 1304 aa14.68□□□□□ -0.06
TNFRSF9-201ENST00000377507 HSCBQ8IWL3 235 aa14.68□□□□□ -0.06
TNFRSF9-201ENST00000377507 KDRP35968 1356 aa14.68□□□□□ -0.06
TNFRSF9-201ENST00000377507 ATP10DQ9P241 1426 aa14.67□□□□□ -0.06
TNFRSF9-201ENST00000377507 MCM4P33991 863 aa14.67□□□□□ -0.06
TNFRSF9-201ENST00000377507 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
TNFRSF9-201ENST00000377507 RPAP2Q8IXW5 612 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF9-201ENST00000377507 ANKRD44Q8N8A2 993 aa14.67□□□□□ -0.06
TNFRSF9-201ENST00000377507 BRPF3Q9ULD4 1205 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms