RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 KIAA1211Q6ZU35 1233 aa28.56■■■□□ 2.16
FOXA2-201ENST00000377115 IBTKQ9P2D0 1353 aaPredicted RBP28.55■■■□□ 2.16
FOXA2-201ENST00000377115 ELL2O00472 640 aaPredicted RBP28.55■■■□□ 2.16
FOXA2-201ENST00000377115 ZSCAN30Q86W11 494 aa28.55■■■□□ 2.16
FOXA2-201ENST00000377115 FRMPD1Q5SYB0 1578 aa28.55■■■□□ 2.16
FOXA2-201ENST00000377115 MINK1Q8N4C8 1332 aaPredicted RBP28.55■■■□□ 2.16
FOXA2-201ENST00000377115 ZNF428Q96B54 188 aa28.55■■■□□ 2.16
FOXA2-201ENST00000377115 TERF2IPQ9NYB0 399 aa28.55■■■□□ 2.16
FOXA2-201ENST00000377115 FCHSD2O94868 740 aa28.54■■■□□ 2.16
FOXA2-201ENST00000377115 MCTP1Q6DN14 999 aa28.54■■■□□ 2.16
FOXA2-201ENST00000377115 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
FOXA2-201ENST00000377115 FBLN1P23142 703 aa28.53■■■□□ 2.16
FOXA2-201ENST00000377115 ANP32BQ92688 251 aaKnown RBP28.53■■■□□ 2.16
FOXA2-201ENST00000377115 SIGLEC1Q9BZZ2 1709 aa28.53■■■□□ 2.16
FOXA2-201ENST00000377115 ARHGAP45Q92619 1136 aa28.53■■■□□ 2.16
FOXA2-201ENST00000377115 CHMP4BQ9H444 224 aaKnown RBP28.53■■■□□ 2.16
FOXA2-201ENST00000377115 FAM135BQ49AJ0 1406 aa28.53■■■□□ 2.16
FOXA2-201ENST00000377115 ABCC4O15439 1325 aa28.52■■■□□ 2.16
FOXA2-201ENST00000377115 PHACTR3Q96KR7 559 aa28.52■■■□□ 2.16
FOXA2-201ENST00000377115 ABCC3O15438 1527 aa28.52■■■□□ 2.16
FOXA2-201ENST00000377115 ATAD2Q6PL18 1390 aa28.51■■■□□ 2.15
FOXA2-201ENST00000377115 PKP1Q13835 747 aa28.5■■■□□ 2.15
FOXA2-201ENST00000377115 CAVIN1Q6NZI2 390 aaKnown RBP28.5■■■□□ 2.15
FOXA2-201ENST00000377115 HMOX1P09601 288 aa28.5■■■□□ 2.15
FOXA2-201ENST00000377115 NCLP19338 710 aaKnown RBP28.5■■■□□ 2.15
FOXA2-201ENST00000377115 PLEKHM2Q8IWE5 1019 aa28.49■■■□□ 2.15
FOXA2-201ENST00000377115 RABEP1Q15276 862 aa28.49■■■□□ 2.15
FOXA2-201ENST00000377115 PIK3C2BO00750 1634 aa28.49■■■□□ 2.15
FOXA2-201ENST00000377115 MSNP26038 577 aaKnown RBP28.48■■■□□ 2.15
FOXA2-201ENST00000377115 ZNF445P59923 1031 aa28.48■■■□□ 2.15
FOXA2-201ENST00000377115 ARHGAP31Q2M1Z3 1444 aa28.48■■■□□ 2.15
FOXA2-201ENST00000377115 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 ZSCAN23Q3MJ62 389 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 REREQ9P2R6 1566 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 OFD1O75665 1012 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 NFE2L2Q16236 605 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 PRAM1Q96QH2 718 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 LMBRD1Q9NUN5 540 aa28.47■■■□□ 2.15
FOXA2-201ENST00000377115 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
FOXA2-201ENST00000377115 ASXL2Q76L83 1435 aa28.46■■■□□ 2.15
FOXA2-201ENST00000377115 PTPRMP28827 1452 aa28.46■■■□□ 2.15
FOXA2-201ENST00000377115 CYP2E1P05181 493 aaPredicted RBP28.45■■■□□ 2.15
FOXA2-201ENST00000377115 CALD1Q05682 793 aaKnown RBP28.45■■■□□ 2.14
FOXA2-201ENST00000377115 NUCB2P80303 420 aa28.44■■■□□ 2.14
FOXA2-201ENST00000377115 HDGFL2Q7Z4V5 671 aaPredicted RBP28.44■■■□□ 2.14
FOXA2-201ENST00000377115 C16orf71Q8IYS4 520 aaPredicted RBP28.44■■■□□ 2.14
FOXA2-201ENST00000377115 KNDC1Q76NI1 1749 aa28.44■■■□□ 2.14
FOXA2-201ENST00000377115 TTC22Q5TAA0 569 aa28.43■■■□□ 2.14
FOXA2-201ENST00000377115 USP26Q9BXU7 913 aa28.43■■■□□ 2.14
FOXA2-201ENST00000377115 RBSNQ9H1K0 784 aa28.43■■■□□ 2.14
FOXA2-201ENST00000377115 TWISTNBQ3B726 338 aaPredicted RBP28.43■■■□□ 2.14
FOXA2-201ENST00000377115 POLKQ9UBT6 870 aa28.43■■■□□ 2.14
FOXA2-201ENST00000377115 CABP1Q9NZU7 370 aa28.42■■■□□ 2.14
FOXA2-201ENST00000377115 KIF20BQ96Q89 1820 aa28.42■■■□□ 2.14
FOXA2-201ENST00000377115 GNAI1P63096 354 aa28.42■■■□□ 2.14
FOXA2-201ENST00000377115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.42■■■□□ 2.14
FOXA2-201ENST00000377115 IFT57Q9NWB7 429 aa28.42■■■□□ 2.14
FOXA2-201ENST00000377115 IDI1Q13907 227 aa28.41■■■□□ 2.14
FOXA2-201ENST00000377115 C8orf58Q8NAV2 365 aa28.41■■■□□ 2.14
FOXA2-201ENST00000377115 PDCL3Q9H2J4 239 aa28.41■■■□□ 2.14
FOXA2-201ENST00000377115 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.4■■■□□ 2.14
FOXA2-201ENST00000377115 OTUD7AQ8TE49 926 aaPredicted RBP28.4■■■□□ 2.14
FOXA2-201ENST00000377115 ZNF853P0CG23 659 aa28.4■■■□□ 2.14
FOXA2-201ENST00000377115 ZGPATQ8N5A5 531 aaKnown RBP28.4■■■□□ 2.14
FOXA2-201ENST00000377115 PRIM1P49642 420 aaKnown RBP28.39■■■□□ 2.14
FOXA2-201ENST00000377115 RBM27Q9P2N5 1060 aaKnown RBP28.39■■■□□ 2.14
FOXA2-201ENST00000377115 CLTCQ00610 1675 aaKnown RBP28.39■■■□□ 2.14
FOXA2-201ENST00000377115 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.14
FOXA2-201ENST00000377115 DCTPP1Q9H773 170 aa28.39■■■□□ 2.13
FOXA2-201ENST00000377115 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
FOXA2-201ENST00000377115 API5Q9BZZ5 524 aaKnown RBP28.38■■■□□ 2.13
FOXA2-201ENST00000377115 PRPF40AO75400 957 aaKnown RBP28.37■■■□□ 2.13
FOXA2-201ENST00000377115 GPT2Q8TD30 523 aa28.37■■■□□ 2.13
FOXA2-201ENST00000377115 YTHDC2Q9H6S0 1430 aaKnown RBP28.37■■■□□ 2.13
FOXA2-201ENST00000377115 CHAMP1Q96JM3 812 aa28.37■■■□□ 2.13
FOXA2-201ENST00000377115 INTS3Q68E01 1043 aaKnown RBP28.36■■■□□ 2.13
FOXA2-201ENST00000377115 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.36■■■□□ 2.13
FOXA2-201ENST00000377115 MLH3Q9UHC1 1453 aa28.36■■■□□ 2.13
FOXA2-201ENST00000377115 PDLIM2Q96JY6 352 aa28.35■■■□□ 2.13
FOXA2-201ENST00000377115 RBM10P98175 930 aaKnown RBP28.34■■■□□ 2.13
FOXA2-201ENST00000377115 NOL7Q9UMY1 257 aaKnown RBP28.34■■■□□ 2.13
FOXA2-201ENST00000377115 ZDHHC9Q9Y397 364 aa28.34■■■□□ 2.13
FOXA2-201ENST00000377115 R3HCC1Q9Y3T6 440 aaKnown RBP28.34■■■□□ 2.13
FOXA2-201ENST00000377115 SDSP20132 328 aa28.33■■■□□ 2.13
FOXA2-201ENST00000377115 HS1BP3Q53T59 392 aa28.33■■■□□ 2.13
FOXA2-201ENST00000377115 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.13
FOXA2-201ENST00000377115 MYO5BQ9ULV0 1848 aa28.32■■■□□ 2.12
FOXA2-201ENST00000377115 FAM83GA6ND36 823 aa28.32■■■□□ 2.12
FOXA2-201ENST00000377115 CFAP44Q96MT7 982 aa28.32■■■□□ 2.12
FOXA2-201ENST00000377115 CWC22Q9HCG8 908 aaKnown RBP28.32■■■□□ 2.12
FOXA2-201ENST00000377115 XPCQ01831 940 aaPredicted RBP28.32■■■□□ 2.12
FOXA2-201ENST00000377115 MAP2P11137 1827 aaKnown RBP28.31■■■□□ 2.12
FOXA2-201ENST00000377115 APBB1O00213 710 aa28.31■■■□□ 2.12
FOXA2-201ENST00000377115 SMARCA5O60264 1052 aaPredicted RBP28.31■■■□□ 2.12
FOXA2-201ENST00000377115 YEATS2Q9ULM3 1422 aa28.31■■■□□ 2.12
FOXA2-201ENST00000377115 ST18O60284 1047 aa28.31■■■□□ 2.12
FOXA2-201ENST00000377115 ATP10DQ9P241 1426 aa28.3■■■□□ 2.12
FOXA2-201ENST00000377115 ZNF500O60304 480 aaPredicted RBP28.29■■■□□ 2.12
FOXA2-201ENST00000377115 IL13P35225 146 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms