RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
ACTN1-202ENST00000376839 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
ACTN1-202ENST00000376839 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
ACTN1-202ENST00000376839 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
ACTN1-202ENST00000376839 ATP7BP35670 1465 aa16.56■□□□□ 0.24
ACTN1-202ENST00000376839 SNX21Q969T3 373 aa16.56■□□□□ 0.24
ACTN1-202ENST00000376839 KIF2CQ99661 725 aa16.56■□□□□ 0.24
ACTN1-202ENST00000376839 IL13P35225 146 aa16.56■□□□□ 0.24
ACTN1-202ENST00000376839 NME9Q86XW9 330 aa16.56■□□□□ 0.24
ACTN1-202ENST00000376839 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 GCC1Q96CN9 775 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 ABCC4O15439 1325 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 CD2BP2O95400 341 aaKnown RBP16.55■□□□□ 0.24
ACTN1-202ENST00000376839 GNAI1P63096 354 aa16.55■□□□□ 0.24
ACTN1-202ENST00000376839 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
ACTN1-202ENST00000376839 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
ACTN1-202ENST00000376839 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
ACTN1-202ENST00000376839 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
ACTN1-202ENST00000376839 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-202ENST00000376839 FAM83GA6ND36 823 aa16.53■□□□□ 0.24
ACTN1-202ENST00000376839 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
ACTN1-202ENST00000376839 TNPO1Q92973 898 aaKnown RBP16.52■□□□□ 0.24
ACTN1-202ENST00000376839 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.23
ACTN1-202ENST00000376839 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.23
ACTN1-202ENST00000376839 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.23
ACTN1-202ENST00000376839 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
ACTN1-202ENST00000376839 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
ACTN1-202ENST00000376839 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 CDK12Q9NYV4 1490 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-202ENST00000376839 DCTN1Q14203 1278 aa16.51■□□□□ 0.23
ACTN1-202ENST00000376839 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
ACTN1-202ENST00000376839 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
ACTN1-202ENST00000376839 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
ACTN1-202ENST00000376839 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
ACTN1-202ENST00000376839 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
ACTN1-202ENST00000376839 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
ACTN1-202ENST00000376839 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-202ENST00000376839 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
ACTN1-202ENST00000376839 CPS1P31327 1500 aa16.49■□□□□ 0.23
ACTN1-202ENST00000376839 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
ACTN1-202ENST00000376839 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
ACTN1-202ENST00000376839 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
ACTN1-202ENST00000376839 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-202ENST00000376839 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
ACTN1-202ENST00000376839 API5Q9BZZ5 524 aaKnown RBP16.47■□□□□ 0.23
ACTN1-202ENST00000376839 MRE11P49959 708 aa16.46■□□□□ 0.23
ACTN1-202ENST00000376839 METP08581 1390 aa16.46■□□□□ 0.23
ACTN1-202ENST00000376839 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-202ENST00000376839 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
ACTN1-202ENST00000376839 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
ACTN1-202ENST00000376839 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
ACTN1-202ENST00000376839 COG3Q96JB2 828 aa16.46■□□□□ 0.23
ACTN1-202ENST00000376839 CDC45O75419 566 aa16.46■□□□□ 0.22
ACTN1-202ENST00000376839 KRT24Q2M2I5 525 aa16.46■□□□□ 0.22
ACTN1-202ENST00000376839 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.22
ACTN1-202ENST00000376839 GRPEL1Q9HAV7 217 aa16.46■□□□□ 0.22
ACTN1-202ENST00000376839 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
ACTN1-202ENST00000376839 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
ACTN1-202ENST00000376839 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
ACTN1-202ENST00000376839 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
ACTN1-202ENST00000376839 NRXN3Q9Y4C0 1643 aa16.44■□□□□ 0.22
ACTN1-202ENST00000376839 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-202ENST00000376839 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
ACTN1-202ENST00000376839 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
ACTN1-202ENST00000376839 SSFA2P28290 1259 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 MLECQ14165 292 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-202ENST00000376839 REREQ9P2R6 1566 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 ATP10DQ9P241 1426 aa16.42■□□□□ 0.22
ACTN1-202ENST00000376839 PRKCSHP14314 528 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-202ENST00000376839 RGS12O14924 1447 aa16.41■□□□□ 0.22
ACTN1-202ENST00000376839 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
ACTN1-202ENST00000376839 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
ACTN1-202ENST00000376839 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
ACTN1-202ENST00000376839 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
ACTN1-202ENST00000376839 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
ACTN1-202ENST00000376839 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
ACTN1-202ENST00000376839 C3P01024 1663 aa16.39■□□□□ 0.21
ACTN1-202ENST00000376839 MCM10Q7L590 875 aa16.39■□□□□ 0.21
ACTN1-202ENST00000376839 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
ACTN1-202ENST00000376839 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-202ENST00000376839 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
ACTN1-202ENST00000376839 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
ACTN1-202ENST00000376839 MSH6P52701 1360 aa16.38■□□□□ 0.21
ACTN1-202ENST00000376839 APBB1O00213 710 aa16.38■□□□□ 0.21
ACTN1-202ENST00000376839 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
ACTN1-202ENST00000376839 AGLP35573 1532 aa16.37■□□□□ 0.21
ACTN1-202ENST00000376839 CLCN1P35523 988 aa16.37■□□□□ 0.21
ACTN1-202ENST00000376839 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-202ENST00000376839 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
ACTN1-202ENST00000376839 CHL1O00533 1208 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms