RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 PHF8Q9UPP1 1060 aa21.79■■□□□ 1.08
HLA-A-202ENST00000376806 SBNO1A3KN83 1393 aa21.79■■□□□ 1.08
HLA-A-202ENST00000376806 LTN1O94822 1766 aa21.78■■□□□ 1.08
HLA-A-202ENST00000376806 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
HLA-A-202ENST00000376806 FLT4P35916 1363 aa21.77■■□□□ 1.08
HLA-A-202ENST00000376806 MAP3K19Q56UN5 1328 aa21.77■■□□□ 1.08
HLA-A-202ENST00000376806 SOX12O15370 315 aa21.76■■□□□ 1.07
HLA-A-202ENST00000376806 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
HLA-A-202ENST00000376806 C14orf37Q86TY3 774 aa21.76■■□□□ 1.07
HLA-A-202ENST00000376806 LTBP4Q8N2S1 1624 aa21.75■■□□□ 1.07
HLA-A-202ENST00000376806 HSP90AB2PQ58FF8 381 aa21.75■■□□□ 1.07
HLA-A-202ENST00000376806 KIF1AQ12756 1690 aa21.74■■□□□ 1.07
HLA-A-202ENST00000376806 CANXP27824 592 aaKnown RBP21.74■■□□□ 1.07
HLA-A-202ENST00000376806 NLRP6P59044 892 aa21.74■■□□□ 1.07
HLA-A-202ENST00000376806 PDE3AQ14432 1141 aa21.74■■□□□ 1.07
HLA-A-202ENST00000376806 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
HLA-A-202ENST00000376806 ARHGEF10O15013 1369 aa21.73■■□□□ 1.07
HLA-A-202ENST00000376806 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
HLA-A-202ENST00000376806 RBM19Q9Y4C8 960 aaKnown RBP21.73■■□□□ 1.07
HLA-A-202ENST00000376806 AEBP1Q8IUX7 1158 aa21.71■■□□□ 1.07
HLA-A-202ENST00000376806 KIF24Q5T7B8 1368 aa21.71■■□□□ 1.07
HLA-A-202ENST00000376806 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
HLA-A-202ENST00000376806 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
HLA-A-202ENST00000376806 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
HLA-A-202ENST00000376806 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
HLA-A-202ENST00000376806 NFAT5O94916 1531 aa21.7■■□□□ 1.06
HLA-A-202ENST00000376806 ABTB2Q8N961 1025 aa21.7■■□□□ 1.06
HLA-A-202ENST00000376806 C19orf44Q9H6X5 657 aa21.7■■□□□ 1.06
HLA-A-202ENST00000376806 PAK3O75914 559 aaPredicted RBP21.69■■□□□ 1.06
HLA-A-202ENST00000376806 FRAT1Q92837 279 aaPredicted RBP21.69■■□□□ 1.06
HLA-A-202ENST00000376806 BCL2L13Q9BXK5 485 aa21.69■■□□□ 1.06
HLA-A-202ENST00000376806 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
HLA-A-202ENST00000376806 NUTM2GQ5VZR2 741 aa21.69■■□□□ 1.06
HLA-A-202ENST00000376806 NCOA3Q9Y6Q9 1424 aa21.68■■□□□ 1.06
HLA-A-202ENST00000376806 PHRF1Q9P1Y6 1649 aaKnown RBP21.68■■□□□ 1.06
HLA-A-202ENST00000376806 AMPHP49418 695 aa21.68■■□□□ 1.06
HLA-A-202ENST00000376806 KDM2BQ8NHM5 1336 aa21.68■■□□□ 1.06
HLA-A-202ENST00000376806 RTL1A6NKG5 1358 aa21.67■■□□□ 1.06
HLA-A-202ENST00000376806 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
HLA-A-202ENST00000376806 THUMPD2Q9BTF0 503 aaKnown RBP21.66■■□□□ 1.06
HLA-A-202ENST00000376806 KDRP35968 1356 aa21.66■■□□□ 1.06
HLA-A-202ENST00000376806 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
HLA-A-202ENST00000376806 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.06
HLA-A-202ENST00000376806 MSH6P52701 1360 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 GNAI1P63096 354 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 PSME1Q06323 249 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 SMC4Q9NTJ3 1288 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 COG6Q9Y2V7 657 aa21.64■■□□□ 1.05
HLA-A-202ENST00000376806 ZNF853P0CG23 659 aa21.63■■□□□ 1.05
HLA-A-202ENST00000376806 HOXC9P31274 260 aa21.63■■□□□ 1.05
HLA-A-202ENST00000376806 CENPQQ7L2Z9 268 aaPredicted RBP21.63■■□□□ 1.05
HLA-A-202ENST00000376806 LAS1LQ9Y4W2 734 aaKnown RBP21.63■■□□□ 1.05
HLA-A-202ENST00000376806 SLIT3O75094 1523 aa21.63■■□□□ 1.05
HLA-A-202ENST00000376806 ATF3P18847 181 aa21.62■■□□□ 1.05
HLA-A-202ENST00000376806 ORAI2Q96SN7 254 aa21.62■■□□□ 1.05
HLA-A-202ENST00000376806 DCCP43146 1447 aa21.62■■□□□ 1.05
HLA-A-202ENST00000376806 SSH1Q8WYL5 1049 aa21.62■■□□□ 1.05
HLA-A-202ENST00000376806 TNNQ9UQP3 1299 aa21.62■■□□□ 1.05
HLA-A-202ENST00000376806 RLBP1P12271 317 aa21.61■■□□□ 1.05
HLA-A-202ENST00000376806 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
HLA-A-202ENST00000376806 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
HLA-A-202ENST00000376806 FAM83GA6ND36 823 aa21.6■■□□□ 1.05
HLA-A-202ENST00000376806 EYA1Q99502 592 aa21.6■■□□□ 1.05
HLA-A-202ENST00000376806 MBIPQ9NS73 344 aa21.6■■□□□ 1.05
HLA-A-202ENST00000376806 LRRC37A3O60309 1634 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 CADPS2Q86UW7 1296 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 CLUAP1Q96AJ1 413 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 CFAP44Q96MT7 982 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 MST1RQ04912 1400 aa21.59■■□□□ 1.05
HLA-A-202ENST00000376806 TCERG1O14776 1098 aaKnown RBP21.58■■□□□ 1.05
HLA-A-202ENST00000376806 AAMPQ13685 434 aa21.58■■□□□ 1.04
HLA-A-202ENST00000376806 DCTN1Q14203 1278 aa21.58■■□□□ 1.04
HLA-A-202ENST00000376806 ZNF428Q96B54 188 aa21.58■■□□□ 1.04
HLA-A-202ENST00000376806 RGPD2P0DJD1 1756 aa21.57■■□□□ 1.04
HLA-A-202ENST00000376806 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
HLA-A-202ENST00000376806 MS4A1P11836 297 aa21.57■■□□□ 1.04
HLA-A-202ENST00000376806 FOXO3O43524 673 aa21.56■■□□□ 1.04
HLA-A-202ENST00000376806 DZIP1LQ8IYY4 767 aaKnown RBP21.56■■□□□ 1.04
HLA-A-202ENST00000376806 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
HLA-A-202ENST00000376806 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
HLA-A-202ENST00000376806 TRIM27P14373 513 aa21.54■■□□□ 1.04
HLA-A-202ENST00000376806 MVPQ14764 893 aaKnown RBP21.54■■□□□ 1.04
HLA-A-202ENST00000376806 SLAIN2Q9P270 581 aa21.54■■□□□ 1.04
HLA-A-202ENST00000376806 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
HLA-A-202ENST00000376806 VAMP4O75379 141 aa21.53■■□□□ 1.04
HLA-A-202ENST00000376806 ATF7IPQ6VMQ6 1270 aa21.53■■□□□ 1.04
HLA-A-202ENST00000376806 IP6K1Q92551 441 aa21.53■■□□□ 1.04
HLA-A-202ENST00000376806 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
HLA-A-202ENST00000376806 CRB1P82279 1406 aa21.53■■□□□ 1.04
HLA-A-202ENST00000376806 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
HLA-A-202ENST00000376806 MTHFSDQ2M296 383 aaKnown RBP21.52■■□□□ 1.04
HLA-A-202ENST00000376806 MCM10Q7L590 875 aa21.52■■□□□ 1.04
HLA-A-202ENST00000376806 USP19O94966 1318 aa21.52■■□□□ 1.04
HLA-A-202ENST00000376806 TSPYL6Q8N831 410 aa21.52■■□□□ 1.03
HLA-A-202ENST00000376806 GAS2L2Q8NHY3 880 aa21.52■■□□□ 1.03
HLA-A-202ENST00000376806 CERKQ8TCT0 537 aa21.52■■□□□ 1.03
HLA-A-202ENST00000376806 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
HLA-A-202ENST00000376806 LTV1Q96GA3 475 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms