RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PAK3O75914 559 aaPredicted RBP27.86■■■□□ 2.05
RNF39-202ENST00000376751 RGS3P49796 1198 aa27.86■■■□□ 2.05
RNF39-202ENST00000376751 PCDHB15Q9Y5E8 787 aa27.86■■■□□ 2.05
RNF39-202ENST00000376751 USP31Q70CQ4 1352 aa27.85■■■□□ 2.05
RNF39-202ENST00000376751 PMFBP1Q8TBY8 1022 aa27.85■■■□□ 2.05
RNF39-202ENST00000376751 AAMPQ13685 434 aa27.84■■■□□ 2.05
RNF39-202ENST00000376751 MVPQ14764 893 aaKnown RBP27.84■■■□□ 2.05
RNF39-202ENST00000376751 EIF4A2Q14240 407 aaKnown RBP27.84■■■□□ 2.05
RNF39-202ENST00000376751 DZIP1LQ8IYY4 767 aaKnown RBP27.84■■■□□ 2.05
RNF39-202ENST00000376751 TRIM27P14373 513 aa27.83■■■□□ 2.05
RNF39-202ENST00000376751 KCNA6P17658 529 aa27.83■■■□□ 2.05
RNF39-202ENST00000376751 RGPD1P0DJD0 1748 aa27.82■■■□□ 2.04
RNF39-202ENST00000376751 MYT1Q01538 1121 aa27.82■■■□□ 2.04
RNF39-202ENST00000376751 LAS1LQ9Y4W2 734 aaKnown RBP27.82■■■□□ 2.04
RNF39-202ENST00000376751 FTSJ3Q8IY81 847 aaKnown RBP27.81■■■□□ 2.04
RNF39-202ENST00000376751 FMN2Q9NZ56 1722 aa27.81■■■□□ 2.04
RNF39-202ENST00000376751 C8orf34Q49A92 452 aa27.8■■■□□ 2.04
RNF39-202ENST00000376751 AEBP1Q8IUX7 1158 aa27.8■■■□□ 2.04
RNF39-202ENST00000376751 PIK3C2AO00443 1686 aa27.8■■■□□ 2.04
RNF39-202ENST00000376751 ZNF142P52746 1687 aaPredicted RBP27.8■■■□□ 2.04
RNF39-202ENST00000376751 NOB1Q9ULX3 412 aaKnown RBP27.8■■■□□ 2.04
RNF39-202ENST00000376751 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
RNF39-202ENST00000376751 PIK3R4Q99570 1358 aa27.78■■■□□ 2.04
RNF39-202ENST00000376751 ZNF853P0CG23 659 aa27.78■■■□□ 2.04
RNF39-202ENST00000376751 FAM161AQ3B820 660 aa27.78■■■□□ 2.04
RNF39-202ENST00000376751 ATF7IPQ6VMQ6 1270 aa27.78■■■□□ 2.04
RNF39-202ENST00000376751 ANKARQ7Z5J8 1434 aa27.77■■■□□ 2.04
RNF39-202ENST00000376751 HSP90AB2PQ58FF8 381 aa27.77■■■□□ 2.04
RNF39-202ENST00000376751 IFT57Q9NWB7 429 aa27.77■■■□□ 2.04
RNF39-202ENST00000376751 SOX12O15370 315 aa27.76■■■□□ 2.03
RNF39-202ENST00000376751 CALD1Q05682 793 aaKnown RBP27.76■■■□□ 2.03
RNF39-202ENST00000376751 NGDNQ8NEJ9 315 aaKnown RBP27.76■■■□□ 2.03
RNF39-202ENST00000376751 ADAMTSL3P82987 1691 aa27.76■■■□□ 2.03
RNF39-202ENST00000376751 ALDH1L2Q3SY69 923 aa27.75■■■□□ 2.03
RNF39-202ENST00000376751 CHD2O14647 1828 aaKnown RBP27.75■■■□□ 2.03
RNF39-202ENST00000376751 VIRMAQ69YN4 1812 aaKnown RBP27.75■■■□□ 2.03
RNF39-202ENST00000376751 FAM83GA6ND36 823 aa27.75■■■□□ 2.03
RNF39-202ENST00000376751 SULT6B1Q6IMI4 303 aa27.75■■■□□ 2.03
RNF39-202ENST00000376751 MBIPQ9NS73 344 aa27.75■■■□□ 2.03
RNF39-202ENST00000376751 KIF16BQ96L93 1317 aa27.74■■■□□ 2.03
RNF39-202ENST00000376751 MARF1Q9Y4F3 1742 aaKnown RBP27.74■■■□□ 2.03
RNF39-202ENST00000376751 GNAI1P63096 354 aa27.74■■■□□ 2.03
RNF39-202ENST00000376751 MAP3K19Q56UN5 1328 aa27.73■■■□□ 2.03
RNF39-202ENST00000376751 LMOD3Q0VAK6 560 aa27.73■■■□□ 2.03
RNF39-202ENST00000376751 TSPYL6Q8N831 410 aa27.73■■■□□ 2.03
RNF39-202ENST00000376751 VAMP4O75379 141 aa27.71■■■□□ 2.03
RNF39-202ENST00000376751 DCTN1Q14203 1278 aa27.71■■■□□ 2.03
RNF39-202ENST00000376751 TMEM57Q8N5G2 664 aa27.71■■■□□ 2.03
RNF39-202ENST00000376751 ITPRIPQ8IWB1 547 aa27.71■■■□□ 2.03
RNF39-202ENST00000376751 ZBTB47Q9UFB7 747 aaPredicted RBP27.71■■■□□ 2.03
RNF39-202ENST00000376751 ZNF428Q96B54 188 aa27.69■■■□□ 2.02
RNF39-202ENST00000376751 CFAP44Q96MT7 982 aa27.69■■■□□ 2.02
RNF39-202ENST00000376751 BRPF1P55201 1214 aaPredicted RBP27.68■■■□□ 2.02
RNF39-202ENST00000376751 RWDD1Q9H446 243 aaPredicted RBP27.68■■■□□ 2.02
RNF39-202ENST00000376751 DDX19BQ9UMR2 479 aa27.68■■■□□ 2.02
RNF39-202ENST00000376751 SBNO1A3KN83 1393 aa27.67■■■□□ 2.02
RNF39-202ENST00000376751 USP54Q70EL1 1684 aa27.67■■■□□ 2.02
RNF39-202ENST00000376751 IPO8O15397 1037 aaKnown RBP27.67■■■□□ 2.02
RNF39-202ENST00000376751 ANKLE2Q86XL3 938 aa27.67■■■□□ 2.02
RNF39-202ENST00000376751 MRPL50Q8N5N7 158 aaKnown RBP27.67■■■□□ 2.02
RNF39-202ENST00000376751 PDZRN3Q9UPQ7 1066 aa27.66■■■□□ 2.02
RNF39-202ENST00000376751 ARHGEF10O15013 1369 aa27.66■■■□□ 2.02
RNF39-202ENST00000376751 FLT4P35916 1363 aa27.66■■■□□ 2.02
RNF39-202ENST00000376751 ELL2O00472 640 aaPredicted RBP27.64■■■□□ 2.02
RNF39-202ENST00000376751 C8orf58Q8NAV2 365 aa27.64■■■□□ 2.02
RNF39-202ENST00000376751 SETD1BQ9UPS6 1966 aaKnown RBP27.63■■■□□ 2.01
RNF39-202ENST00000376751 ZBTB40Q9NUA8 1239 aa27.62■■■□□ 2.01
RNF39-202ENST00000376751 TWISTNBQ3B726 338 aaPredicted RBP27.62■■■□□ 2.01
RNF39-202ENST00000376751 NLRP6P59044 892 aa27.6■■■□□ 2.01
RNF39-202ENST00000376751 RBM33Q96EV2 1170 aaKnown RBP27.6■■■□□ 2.01
RNF39-202ENST00000376751 HDAC1Q13547 482 aaPredicted RBP27.6■■■□□ 2.01
RNF39-202ENST00000376751 NUTM2GQ5VZR2 741 aa27.6■■■□□ 2.01
RNF39-202ENST00000376751 MCM10Q7L590 875 aa27.59■■■□□ 2.01
RNF39-202ENST00000376751 AMPHP49418 695 aa27.58■■■□□ 2.01
RNF39-202ENST00000376751 KDRP35968 1356 aa27.58■■■□□ 2.01
RNF39-202ENST00000376751 ARHGAP45Q92619 1136 aa27.57■■■□□ 2
RNF39-202ENST00000376751 IGSF1Q8N6C5 1336 aa27.56■■■□□ 2
RNF39-202ENST00000376751 EYA1Q99502 592 aa27.55■■■□□ 2
RNF39-202ENST00000376751 CRB1P82279 1406 aa27.55■■■□□ 2
RNF39-202ENST00000376751 ADGRL3Q9HAR2 1447 aa27.55■■■□□ 2
RNF39-202ENST00000376751 CHL1O00533 1208 aa27.55■■■□□ 2
RNF39-202ENST00000376751 PHF8Q9UPP1 1060 aa27.55■■■□□ 2
RNF39-202ENST00000376751 NWD1Q149M9 1564 aa27.54■■■□□ 2
RNF39-202ENST00000376751 FOXO3O43524 673 aa27.54■■■□□ 2
RNF39-202ENST00000376751 ABCC4O15439 1325 aa27.54■■■□□ 2
RNF39-202ENST00000376751 KRT24Q2M2I5 525 aa27.53■■■□□ 2
RNF39-202ENST00000376751 NPHP4O75161 1426 aaPredicted RBP27.53■■■□□ 2
RNF39-202ENST00000376751 MTHFSDQ2M296 383 aaKnown RBP27.53■■■□□ 2
RNF39-202ENST00000376751 DDRGK1Q96HY6 314 aa27.53■■■□□ 2
RNF39-202ENST00000376751 ABTB2Q8N961 1025 aa27.52■■■□□ 2
RNF39-202ENST00000376751 HOXC9P31274 260 aa27.51■■■□□ 2
RNF39-202ENST00000376751 USP19O94966 1318 aa27.51■■□□□ 1.99
RNF39-202ENST00000376751 SEC24BO95487 1268 aa27.5■■□□□ 1.99
RNF39-202ENST00000376751 SMC5Q8IY18 1101 aa27.5■■□□□ 1.99
RNF39-202ENST00000376751 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
RNF39-202ENST00000376751 LTN1O94822 1766 aa27.5■■□□□ 1.99
RNF39-202ENST00000376751 ZBTB7BO15156 539 aaPredicted RBP27.49■■□□□ 1.99
RNF39-202ENST00000376751 KIF24Q5T7B8 1368 aa27.49■■□□□ 1.99
RNF39-202ENST00000376751 KIAA0232Q92628 1395 aa27.48■■□□□ 1.99
RNF39-202ENST00000376751 LRRC37A3O60309 1634 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms