RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
TRIM39-201ENST00000376656 PKP1Q13835 747 aa20.43■□□□□ 0.86
TRIM39-201ENST00000376656 ZSCAN23Q3MJ62 389 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 GGT6Q6P531 493 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
TRIM39-201ENST00000376656 STK26Q9P289 416 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 LMBRD1Q9NUN5 540 aa20.42■□□□□ 0.86
TRIM39-201ENST00000376656 PTCH1Q13635 1447 aa20.41■□□□□ 0.86
TRIM39-201ENST00000376656 RBSNQ9H1K0 784 aa20.41■□□□□ 0.86
TRIM39-201ENST00000376656 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
TRIM39-201ENST00000376656 RABEP1Q15276 862 aa20.41■□□□□ 0.86
TRIM39-201ENST00000376656 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
TRIM39-201ENST00000376656 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
TRIM39-201ENST00000376656 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
TRIM39-201ENST00000376656 CYP2E1P05181 493 aaPredicted RBP20.4■□□□□ 0.86
TRIM39-201ENST00000376656 ARHGAP45Q92619 1136 aa20.4■□□□□ 0.86
TRIM39-201ENST00000376656 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
TRIM39-201ENST00000376656 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
TRIM39-201ENST00000376656 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
TRIM39-201ENST00000376656 FCHSD2O94868 740 aa20.39■□□□□ 0.86
TRIM39-201ENST00000376656 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.86
TRIM39-201ENST00000376656 NUCB2P80303 420 aa20.39■□□□□ 0.85
TRIM39-201ENST00000376656 ABCC4O15439 1325 aa20.39■□□□□ 0.85
TRIM39-201ENST00000376656 FBLN1P23142 703 aa20.38■□□□□ 0.85
TRIM39-201ENST00000376656 PHACTR3Q96KR7 559 aa20.38■□□□□ 0.85
TRIM39-201ENST00000376656 CD163L1Q9NR16 1453 aa20.38■□□□□ 0.85
TRIM39-201ENST00000376656 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 TERF2IPQ9NYB0 399 aa20.37■□□□□ 0.85
TRIM39-201ENST00000376656 R3HCC1Q9Y3T6 440 aaKnown RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
TRIM39-201ENST00000376656 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 RBM27Q9P2N5 1060 aaKnown RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
TRIM39-201ENST00000376656 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
TRIM39-201ENST00000376656 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
TRIM39-201ENST00000376656 MINK1Q8N4C8 1332 aaPredicted RBP20.36■□□□□ 0.85
TRIM39-201ENST00000376656 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
TRIM39-201ENST00000376656 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 PDLIM2Q96JY6 352 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 NOL7Q9UMY1 257 aaKnown RBP20.35■□□□□ 0.85
TRIM39-201ENST00000376656 PRPF40AO75400 957 aaKnown RBP20.35■□□□□ 0.85
TRIM39-201ENST00000376656 HMOX1P09601 288 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 ZGPATQ8N5A5 531 aaKnown RBP20.35■□□□□ 0.85
TRIM39-201ENST00000376656 HS1BP3Q53T59 392 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
TRIM39-201ENST00000376656 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
TRIM39-201ENST00000376656 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
TRIM39-201ENST00000376656 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
TRIM39-201ENST00000376656 CHAMP1Q96JM3 812 aa20.34■□□□□ 0.85
TRIM39-201ENST00000376656 MBIPQ9NS73 344 aa20.34■□□□□ 0.85
TRIM39-201ENST00000376656 TERF1P54274 439 aa20.33■□□□□ 0.85
TRIM39-201ENST00000376656 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.84
TRIM39-201ENST00000376656 ZNF500O60304 480 aaPredicted RBP20.32■□□□□ 0.84
TRIM39-201ENST00000376656 ZDHHC9Q9Y397 364 aa20.32■□□□□ 0.84
TRIM39-201ENST00000376656 CDC42BPGQ6DT37 1551 aa20.32■□□□□ 0.84
TRIM39-201ENST00000376656 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
TRIM39-201ENST00000376656 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
TRIM39-201ENST00000376656 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
TRIM39-201ENST00000376656 GNAI1P63096 354 aa20.31■□□□□ 0.84
TRIM39-201ENST00000376656 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
TRIM39-201ENST00000376656 FAM13BQ9NYF5 915 aa20.31■□□□□ 0.84
TRIM39-201ENST00000376656 FRMPD1Q5SYB0 1578 aa20.31■□□□□ 0.84
TRIM39-201ENST00000376656 HECW2Q9P2P5 1572 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
TRIM39-201ENST00000376656 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 CWC22Q9HCG8 908 aaKnown RBP20.3■□□□□ 0.84
TRIM39-201ENST00000376656 POLKQ9UBT6 870 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 ABCC3O15438 1527 aa20.3■□□□□ 0.84
TRIM39-201ENST00000376656 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
TRIM39-201ENST00000376656 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
TRIM39-201ENST00000376656 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
TRIM39-201ENST00000376656 TMEM63CQ9P1W3 806 aa20.29■□□□□ 0.84
TRIM39-201ENST00000376656 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
TRIM39-201ENST00000376656 PIK3C2BO00750 1634 aa20.29■□□□□ 0.84
TRIM39-201ENST00000376656 PTPRMP28827 1452 aa20.28■□□□□ 0.84
TRIM39-201ENST00000376656 SDSP20132 328 aa20.28■□□□□ 0.84
TRIM39-201ENST00000376656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRIM39-201ENST00000376656 CABP1Q9NZU7 370 aa20.28■□□□□ 0.84
TRIM39-201ENST00000376656 ZKSCAN5Q9Y2L8 839 aa20.28■□□□□ 0.84
TRIM39-201ENST00000376656 SYCE3A1L190 88 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 UQCRHLA0A096LP55 91 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 ST18O60284 1047 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 UQCRHP07919 91 aa20.27■□□□□ 0.84
TRIM39-201ENST00000376656 FOXD4L5Q5VV16 416 aaPredicted RBP20.27■□□□□ 0.83
TRIM39-201ENST00000376656 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.83
TRIM39-201ENST00000376656 APBB1O00213 710 aa20.26■□□□□ 0.83
TRIM39-201ENST00000376656 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
TRIM39-201ENST00000376656 LRSAM1Q6UWE0 723 aa20.26■□□□□ 0.83
TRIM39-201ENST00000376656 IDI1Q13907 227 aa20.24■□□□□ 0.83
TRIM39-201ENST00000376656 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms