RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
CLCN6-206ENST00000376496 CCDC27Q2M243 656 aa16.44■□□□□ 0.22
CLCN6-206ENST00000376496 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
CLCN6-206ENST00000376496 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
CLCN6-206ENST00000376496 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
CLCN6-206ENST00000376496 MARF1Q9Y4F3 1742 aaKnown RBP16.43■□□□□ 0.22
CLCN6-206ENST00000376496 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
CLCN6-206ENST00000376496 BCL2L13Q9BXK5 485 aa16.42■□□□□ 0.22
CLCN6-206ENST00000376496 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
CLCN6-206ENST00000376496 NEFMP07197 916 aa16.41■□□□□ 0.22
CLCN6-206ENST00000376496 ATF3P18847 181 aa16.41■□□□□ 0.22
CLCN6-206ENST00000376496 ZNF335Q9H4Z2 1342 aaPredicted RBP16.41■□□□□ 0.22
CLCN6-206ENST00000376496 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
CLCN6-206ENST00000376496 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
CLCN6-206ENST00000376496 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
CLCN6-206ENST00000376496 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
CLCN6-206ENST00000376496 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
CLCN6-206ENST00000376496 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
CLCN6-206ENST00000376496 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
CLCN6-206ENST00000376496 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
CLCN6-206ENST00000376496 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
CLCN6-206ENST00000376496 FLT4P35916 1363 aa16.39■□□□□ 0.21
CLCN6-206ENST00000376496 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
CLCN6-206ENST00000376496 HOXC9P31274 260 aa16.38■□□□□ 0.21
CLCN6-206ENST00000376496 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
CLCN6-206ENST00000376496 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
CLCN6-206ENST00000376496 FRAT1Q92837 279 aaPredicted RBP16.37■□□□□ 0.21
CLCN6-206ENST00000376496 EYA1Q99502 592 aa16.37■□□□□ 0.21
CLCN6-206ENST00000376496 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
CLCN6-206ENST00000376496 MST1RQ04912 1400 aa16.36■□□□□ 0.21
CLCN6-206ENST00000376496 TNNQ9UQP3 1299 aa16.36■□□□□ 0.21
CLCN6-206ENST00000376496 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
CLCN6-206ENST00000376496 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
CLCN6-206ENST00000376496 DLG5Q8TDM6 1919 aa16.34■□□□□ 0.21
CLCN6-206ENST00000376496 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
CLCN6-206ENST00000376496 MCM10Q7L590 875 aa16.33■□□□□ 0.2
CLCN6-206ENST00000376496 RGPD1P0DJD0 1748 aa16.33■□□□□ 0.2
CLCN6-206ENST00000376496 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
CLCN6-206ENST00000376496 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 GCP02774 474 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 XIRP1Q702N8 1843 aaKnown RBP16.32■□□□□ 0.2
CLCN6-206ENST00000376496 LTN1O94822 1766 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 MSH6P52701 1360 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
CLCN6-206ENST00000376496 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
CLCN6-206ENST00000376496 CADPS2Q86UW7 1296 aa16.31■□□□□ 0.2
CLCN6-206ENST00000376496 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
CLCN6-206ENST00000376496 NFAT5O94916 1531 aa16.31■□□□□ 0.2
CLCN6-206ENST00000376496 ZC3H6P61129 1189 aaKnown RBP16.3■□□□□ 0.2
CLCN6-206ENST00000376496 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
CLCN6-206ENST00000376496 LRRC59Q96AG4 307 aaKnown RBP16.3■□□□□ 0.2
CLCN6-206ENST00000376496 CLUAP1Q96AJ1 413 aa16.3■□□□□ 0.2
CLCN6-206ENST00000376496 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
CLCN6-206ENST00000376496 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
CLCN6-206ENST00000376496 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
CLCN6-206ENST00000376496 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
CLCN6-206ENST00000376496 IL16Q14005 1332 aa16.29■□□□□ 0.2
CLCN6-206ENST00000376496 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
CLCN6-206ENST00000376496 IP6K1Q92551 441 aa16.29■□□□□ 0.2
CLCN6-206ENST00000376496 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
CLCN6-206ENST00000376496 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 COG6Q9Y2V7 657 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 SKAP1Q86WV1 359 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
CLCN6-206ENST00000376496 RLBP1P12271 317 aa16.27■□□□□ 0.2
CLCN6-206ENST00000376496 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.19
CLCN6-206ENST00000376496 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.19
CLCN6-206ENST00000376496 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.19
CLCN6-206ENST00000376496 KIF1AQ12756 1690 aa16.27■□□□□ 0.19
CLCN6-206ENST00000376496 BRINP3Q76B58 766 aa16.26■□□□□ 0.19
CLCN6-206ENST00000376496 DCCP43146 1447 aa16.26■□□□□ 0.19
CLCN6-206ENST00000376496 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
CLCN6-206ENST00000376496 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
CLCN6-206ENST00000376496 KDRP35968 1356 aa16.25■□□□□ 0.19
CLCN6-206ENST00000376496 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
CLCN6-206ENST00000376496 RGPD2P0DJD1 1756 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 GNAI1P63096 354 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 SLAIN2Q9P270 581 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 USP19O94966 1318 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
CLCN6-206ENST00000376496 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
CLCN6-206ENST00000376496 MED1Q15648 1581 aaPredicted RBP16.23■□□□□ 0.19
CLCN6-206ENST00000376496 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
CLCN6-206ENST00000376496 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
CLCN6-206ENST00000376496 SLIT3O75094 1523 aa16.22■□□□□ 0.19
CLCN6-206ENST00000376496 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
CLCN6-206ENST00000376496 CHRNA2Q15822 529 aa16.22■□□□□ 0.19
CLCN6-206ENST00000376496 ALS2Q96Q42 1657 aa16.22■□□□□ 0.19
CLCN6-206ENST00000376496 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
CLCN6-206ENST00000376496 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
CLCN6-206ENST00000376496 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
CLCN6-206ENST00000376496 VAMP4O75379 141 aa16.2■□□□□ 0.18
CLCN6-206ENST00000376496 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms