RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 RSPH6AQ9H0K4 717 aa23.53■■□□□ 1.36
PCCA-202ENST00000376285 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
PCCA-202ENST00000376285 IL13P35225 146 aa23.52■■□□□ 1.36
PCCA-202ENST00000376285 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
PCCA-202ENST00000376285 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
PCCA-202ENST00000376285 AAMPQ13685 434 aa23.5■■□□□ 1.35
PCCA-202ENST00000376285 PMFBP1Q8TBY8 1022 aa23.5■■□□□ 1.35
PCCA-202ENST00000376285 PRKAR2BP31323 418 aa23.49■■□□□ 1.35
PCCA-202ENST00000376285 RIPK4P57078 832 aa23.48■■□□□ 1.35
PCCA-202ENST00000376285 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
PCCA-202ENST00000376285 PEAK1Q9H792 1746 aa23.48■■□□□ 1.35
PCCA-202ENST00000376285 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
PCCA-202ENST00000376285 IL16Q14005 1332 aa23.47■■□□□ 1.35
PCCA-202ENST00000376285 PCDHB15Q9Y5E8 787 aa23.47■■□□□ 1.35
PCCA-202ENST00000376285 PIK3C2AO00443 1686 aa23.47■■□□□ 1.35
PCCA-202ENST00000376285 USP31Q70CQ4 1352 aa23.46■■□□□ 1.35
PCCA-202ENST00000376285 TTC21AQ8NDW8 1320 aa23.46■■□□□ 1.35
PCCA-202ENST00000376285 HMOX1P09601 288 aa23.46■■□□□ 1.35
PCCA-202ENST00000376285 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
PCCA-202ENST00000376285 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
PCCA-202ENST00000376285 NGDNQ8NEJ9 315 aaKnown RBP23.44■■□□□ 1.34
PCCA-202ENST00000376285 NEFMP07197 916 aa23.43■■□□□ 1.34
PCCA-202ENST00000376285 MVPQ14764 893 aaKnown RBP23.42■■□□□ 1.34
PCCA-202ENST00000376285 PHACTR3Q96KR7 559 aa23.42■■□□□ 1.34
PCCA-202ENST00000376285 VIRMAQ69YN4 1812 aaKnown RBP23.42■■□□□ 1.34
PCCA-202ENST00000376285 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
PCCA-202ENST00000376285 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
PCCA-202ENST00000376285 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
PCCA-202ENST00000376285 NPHP4O75161 1426 aaPredicted RBP23.41■■□□□ 1.34
PCCA-202ENST00000376285 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
PCCA-202ENST00000376285 SSH1Q8WYL5 1049 aa23.41■■□□□ 1.34
PCCA-202ENST00000376285 DZIP1LQ8IYY4 767 aaKnown RBP23.4■■□□□ 1.34
PCCA-202ENST00000376285 USP54Q70EL1 1684 aa23.4■■□□□ 1.34
PCCA-202ENST00000376285 NFE2L2Q16236 605 aa23.4■■□□□ 1.34
PCCA-202ENST00000376285 FTSJ3Q8IY81 847 aaKnown RBP23.39■■□□□ 1.33
PCCA-202ENST00000376285 TRIM27P14373 513 aa23.38■■□□□ 1.33
PCCA-202ENST00000376285 EIF4A2Q14240 407 aaKnown RBP23.38■■□□□ 1.33
PCCA-202ENST00000376285 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
PCCA-202ENST00000376285 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
PCCA-202ENST00000376285 ATF7IPQ6VMQ6 1270 aa23.35■■□□□ 1.33
PCCA-202ENST00000376285 RWDD1Q9H446 243 aaPredicted RBP23.35■■□□□ 1.33
PCCA-202ENST00000376285 SOX12O15370 315 aa23.34■■□□□ 1.33
PCCA-202ENST00000376285 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
PCCA-202ENST00000376285 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
PCCA-202ENST00000376285 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
PCCA-202ENST00000376285 NOB1Q9ULX3 412 aaKnown RBP23.33■■□□□ 1.33
PCCA-202ENST00000376285 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
PCCA-202ENST00000376285 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.32
PCCA-202ENST00000376285 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
PCCA-202ENST00000376285 SLC4A3P48751 1232 aa23.31■■□□□ 1.32
PCCA-202ENST00000376285 AEBP1Q8IUX7 1158 aa23.31■■□□□ 1.32
PCCA-202ENST00000376285 SULT6B1Q6IMI4 303 aa23.3■■□□□ 1.32
PCCA-202ENST00000376285 FLT4P35916 1363 aa23.3■■□□□ 1.32
PCCA-202ENST00000376285 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
PCCA-202ENST00000376285 USP19O94966 1318 aa23.29■■□□□ 1.32
PCCA-202ENST00000376285 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
PCCA-202ENST00000376285 THUMPD2Q9BTF0 503 aaKnown RBP23.29■■□□□ 1.32
PCCA-202ENST00000376285 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
PCCA-202ENST00000376285 KIF16BQ96L93 1317 aa23.29■■□□□ 1.32
PCCA-202ENST00000376285 NLRP6P59044 892 aa23.28■■□□□ 1.32
PCCA-202ENST00000376285 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
PCCA-202ENST00000376285 CALD1Q05682 793 aaKnown RBP23.28■■□□□ 1.32
PCCA-202ENST00000376285 SEC24BO95487 1268 aa23.27■■□□□ 1.32
PCCA-202ENST00000376285 LMOD3Q0VAK6 560 aa23.27■■□□□ 1.32
PCCA-202ENST00000376285 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
PCCA-202ENST00000376285 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
PCCA-202ENST00000376285 ARHGEF10O15013 1369 aa23.25■■□□□ 1.31
PCCA-202ENST00000376285 LTN1O94822 1766 aa23.25■■□□□ 1.31
PCCA-202ENST00000376285 IPO8O15397 1037 aaKnown RBP23.25■■□□□ 1.31
PCCA-202ENST00000376285 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
PCCA-202ENST00000376285 HDAC1Q13547 482 aaPredicted RBP23.24■■□□□ 1.31
PCCA-202ENST00000376285 ABTB2Q8N961 1025 aa23.24■■□□□ 1.31
PCCA-202ENST00000376285 GNAI1P63096 354 aa23.24■■□□□ 1.31
PCCA-202ENST00000376285 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
PCCA-202ENST00000376285 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
PCCA-202ENST00000376285 DAXXQ9UER7 740 aaPredicted RBP23.24■■□□□ 1.31
PCCA-202ENST00000376285 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
PCCA-202ENST00000376285 AMPHP49418 695 aa23.23■■□□□ 1.31
PCCA-202ENST00000376285 BRPF1P55201 1214 aaPredicted RBP23.23■■□□□ 1.31
PCCA-202ENST00000376285 ZBTB40Q9NUA8 1239 aa23.23■■□□□ 1.31
PCCA-202ENST00000376285 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
PCCA-202ENST00000376285 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
PCCA-202ENST00000376285 VAMP4O75379 141 aa23.21■■□□□ 1.31
PCCA-202ENST00000376285 ESCO1Q5FWF5 840 aa23.21■■□□□ 1.31
PCCA-202ENST00000376285 MBIPQ9NS73 344 aa23.21■■□□□ 1.31
PCCA-202ENST00000376285 C14orf37Q86TY3 774 aa23.2■■□□□ 1.3
PCCA-202ENST00000376285 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
PCCA-202ENST00000376285 KDRP35968 1356 aa23.2■■□□□ 1.3
PCCA-202ENST00000376285 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
PCCA-202ENST00000376285 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
PCCA-202ENST00000376285 IGSF1Q8N6C5 1336 aa23.18■■□□□ 1.3
PCCA-202ENST00000376285 HOXC9P31274 260 aa23.18■■□□□ 1.3
PCCA-202ENST00000376285 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
PCCA-202ENST00000376285 EYA1Q99502 592 aa23.17■■□□□ 1.3
PCCA-202ENST00000376285 NFAT5O94916 1531 aa23.17■■□□□ 1.3
PCCA-202ENST00000376285 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
PCCA-202ENST00000376285 STRCP1A6NGW2 1772 aa23.16■■□□□ 1.3
PCCA-202ENST00000376285 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
PCCA-202ENST00000376285 PSME1Q06323 249 aa23.15■■□□□ 1.3
PCCA-202ENST00000376285 ELL2O00472 640 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms