RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 ZNF142P52746 1687 aaPredicted RBP33.78■■■■□ 3
CUL4A-202ENST00000375440 EIF4A2Q14240 407 aaKnown RBP33.77■■■■□ 3
CUL4A-202ENST00000375440 ADAMTSL3P82987 1691 aa33.77■■■■□ 3
CUL4A-202ENST00000375440 ANP32AP39687 249 aaKnown RBP33.77■■■■□ 3
CUL4A-202ENST00000375440 THUMPD2Q9BTF0 503 aaKnown RBP33.76■■■■□ 3
CUL4A-202ENST00000375440 ANKARQ7Z5J8 1434 aa33.75■■■□□ 2.99
CUL4A-202ENST00000375440 NGDNQ8NEJ9 315 aaKnown RBP33.75■■■□□ 2.99
CUL4A-202ENST00000375440 DZIP1LQ8IYY4 767 aaKnown RBP33.74■■■□□ 2.99
CUL4A-202ENST00000375440 FMN2Q9NZ56 1722 aa33.73■■■□□ 2.99
CUL4A-202ENST00000375440 MVPQ14764 893 aaKnown RBP33.73■■■□□ 2.99
CUL4A-202ENST00000375440 CALD1Q05682 793 aaKnown RBP33.72■■■□□ 2.99
CUL4A-202ENST00000375440 ANKLE2Q86XL3 938 aa33.72■■■□□ 2.99
CUL4A-202ENST00000375440 CHD2O14647 1828 aaKnown RBP33.72■■■□□ 2.99
CUL4A-202ENST00000375440 TRIM27P14373 513 aa33.71■■■□□ 2.99
CUL4A-202ENST00000375440 PCDHB15Q9Y5E8 787 aa33.71■■■□□ 2.99
CUL4A-202ENST00000375440 LAS1LQ9Y4W2 734 aaKnown RBP33.71■■■□□ 2.99
CUL4A-202ENST00000375440 HSP90AB2PQ58FF8 381 aa33.7■■■□□ 2.99
CUL4A-202ENST00000375440 AEBP1Q8IUX7 1158 aa33.7■■■□□ 2.99
CUL4A-202ENST00000375440 RGPD1P0DJD0 1748 aa33.7■■■□□ 2.99
CUL4A-202ENST00000375440 PIK3C2AO00443 1686 aa33.7■■■□□ 2.98
CUL4A-202ENST00000375440 ZNF853P0CG23 659 aa33.69■■■□□ 2.98
CUL4A-202ENST00000375440 FTSJ3Q8IY81 847 aaKnown RBP33.69■■■□□ 2.98
CUL4A-202ENST00000375440 IFT57Q9NWB7 429 aa33.69■■■□□ 2.98
CUL4A-202ENST00000375440 IPO9Q96P70 1041 aaKnown RBP33.68■■■□□ 2.98
CUL4A-202ENST00000375440 LMOD3Q0VAK6 560 aa33.68■■■□□ 2.98
CUL4A-202ENST00000375440 SULT6B1Q6IMI4 303 aa33.68■■■□□ 2.98
CUL4A-202ENST00000375440 ATF7IPQ6VMQ6 1270 aa33.68■■■□□ 2.98
CUL4A-202ENST00000375440 NOB1Q9ULX3 412 aaKnown RBP33.68■■■□□ 2.98
CUL4A-202ENST00000375440 SETD1BQ9UPS6 1966 aaKnown RBP33.68■■■□□ 2.98
CUL4A-202ENST00000375440 GNAI1P63096 354 aa33.67■■■□□ 2.98
CUL4A-202ENST00000375440 ALDH1L2Q3SY69 923 aa33.67■■■□□ 2.98
CUL4A-202ENST00000375440 SOX12O15370 315 aa33.67■■■□□ 2.98
CUL4A-202ENST00000375440 RGS3P49796 1198 aa33.67■■■□□ 2.98
CUL4A-202ENST00000375440 MAP3K19Q56UN5 1328 aa33.66■■■□□ 2.98
CUL4A-202ENST00000375440 KIF16BQ96L93 1317 aa33.64■■■□□ 2.98
CUL4A-202ENST00000375440 ZNF428Q96B54 188 aa33.64■■■□□ 2.98
CUL4A-202ENST00000375440 MBIPQ9NS73 344 aa33.63■■■□□ 2.97
CUL4A-202ENST00000375440 FAM83GA6ND36 823 aa33.63■■■□□ 2.97
CUL4A-202ENST00000375440 ERICH6Q7L0X2 663 aa33.62■■■□□ 2.97
CUL4A-202ENST00000375440 NPM2Q86SE8 214 aaKnown RBP33.61■■■□□ 2.97
CUL4A-202ENST00000375440 CFAP44Q96MT7 982 aa33.61■■■□□ 2.97
CUL4A-202ENST00000375440 VAMP4O75379 141 aa33.61■■■□□ 2.97
CUL4A-202ENST00000375440 BRPF1P55201 1214 aaPredicted RBP33.61■■■□□ 2.97
CUL4A-202ENST00000375440 NOP58Q9Y2X3 529 aaKnown RBP33.61■■■□□ 2.97
CUL4A-202ENST00000375440 SBNO1A3KN83 1393 aa33.6■■■□□ 2.97
CUL4A-202ENST00000375440 FAM161AQ3B820 660 aa33.6■■■□□ 2.97
CUL4A-202ENST00000375440 C8orf34Q49A92 452 aa33.6■■■□□ 2.97
CUL4A-202ENST00000375440 TSPYL6Q8N831 410 aa33.6■■■□□ 2.97
CUL4A-202ENST00000375440 MARF1Q9Y4F3 1742 aaKnown RBP33.59■■■□□ 2.97
CUL4A-202ENST00000375440 FLT4P35916 1363 aa33.59■■■□□ 2.97
CUL4A-202ENST00000375440 IPO8O15397 1037 aaKnown RBP33.58■■■□□ 2.97
CUL4A-202ENST00000375440 DCTN1Q14203 1278 aa33.58■■■□□ 2.97
CUL4A-202ENST00000375440 PAK3O75914 559 aaPredicted RBP33.56■■■□□ 2.96
CUL4A-202ENST00000375440 DDX19BQ9UMR2 479 aa33.56■■■□□ 2.96
CUL4A-202ENST00000375440 ARHGEF10O15013 1369 aa33.56■■■□□ 2.96
CUL4A-202ENST00000375440 USP54Q70EL1 1684 aa33.56■■■□□ 2.96
CUL4A-202ENST00000375440 NLRP6P59044 892 aa33.55■■■□□ 2.96
CUL4A-202ENST00000375440 ITPRIPQ8IWB1 547 aa33.55■■■□□ 2.96
CUL4A-202ENST00000375440 TMEM57Q8N5G2 664 aa33.55■■■□□ 2.96
CUL4A-202ENST00000375440 RWDD1Q9H446 243 aaPredicted RBP33.55■■■□□ 2.96
CUL4A-202ENST00000375440 RBM33Q96EV2 1170 aaKnown RBP33.52■■■□□ 2.96
CUL4A-202ENST00000375440 MRPL50Q8N5N7 158 aaKnown RBP33.52■■■□□ 2.96
CUL4A-202ENST00000375440 AMPHP49418 695 aa33.5■■■□□ 2.95
CUL4A-202ENST00000375440 C8orf58Q8NAV2 365 aa33.5■■■□□ 2.95
CUL4A-202ENST00000375440 ELL2O00472 640 aaPredicted RBP33.5■■■□□ 2.95
CUL4A-202ENST00000375440 TWISTNBQ3B726 338 aaPredicted RBP33.5■■■□□ 2.95
CUL4A-202ENST00000375440 PHF8Q9UPP1 1060 aa33.49■■■□□ 2.95
CUL4A-202ENST00000375440 KDRP35968 1356 aa33.49■■■□□ 2.95
CUL4A-202ENST00000375440 NPHP4O75161 1426 aaPredicted RBP33.49■■■□□ 2.95
CUL4A-202ENST00000375440 NUTM2GQ5VZR2 741 aa33.49■■■□□ 2.95
CUL4A-202ENST00000375440 ADGRL3Q9HAR2 1447 aa33.48■■■□□ 2.95
CUL4A-202ENST00000375440 ZBTB40Q9NUA8 1239 aa33.47■■■□□ 2.95
CUL4A-202ENST00000375440 ZBTB47Q9UFB7 747 aaPredicted RBP33.47■■■□□ 2.95
CUL4A-202ENST00000375440 MYT1Q01538 1121 aa33.47■■■□□ 2.95
CUL4A-202ENST00000375440 ABTB2Q8N961 1025 aa33.47■■■□□ 2.95
CUL4A-202ENST00000375440 IGSF1Q8N6C5 1336 aa33.46■■■□□ 2.95
CUL4A-202ENST00000375440 ARHGAP45Q92619 1136 aa33.46■■■□□ 2.95
CUL4A-202ENST00000375440 PDZRN3Q9UPQ7 1066 aa33.46■■■□□ 2.95
CUL4A-202ENST00000375440 EYA1Q99502 592 aa33.46■■■□□ 2.95
CUL4A-202ENST00000375440 VIRMAQ69YN4 1812 aaKnown RBP33.45■■■□□ 2.95
CUL4A-202ENST00000375440 MCM10Q7L590 875 aa33.45■■■□□ 2.95
CUL4A-202ENST00000375440 KIF24Q5T7B8 1368 aa33.45■■■□□ 2.94
CUL4A-202ENST00000375440 HDAC1Q13547 482 aaPredicted RBP33.44■■■□□ 2.94
CUL4A-202ENST00000375440 CHL1O00533 1208 aa33.43■■■□□ 2.94
CUL4A-202ENST00000375440 HOXC9P31274 260 aa33.42■■■□□ 2.94
CUL4A-202ENST00000375440 MTHFSDQ2M296 383 aaKnown RBP33.4■■■□□ 2.94
CUL4A-202ENST00000375440 CRB1P82279 1406 aa33.39■■■□□ 2.94
CUL4A-202ENST00000375440 FOXO3O43524 673 aa33.38■■■□□ 2.93
CUL4A-202ENST00000375440 NWD1Q149M9 1564 aa33.37■■■□□ 2.93
CUL4A-202ENST00000375440 ABCC4O15439 1325 aa33.36■■■□□ 2.93
CUL4A-202ENST00000375440 ESCO1Q5FWF5 840 aa33.35■■■□□ 2.93
CUL4A-202ENST00000375440 KRT24Q2M2I5 525 aa33.34■■■□□ 2.93
CUL4A-202ENST00000375440 C14orf37Q86TY3 774 aa33.34■■■□□ 2.93
CUL4A-202ENST00000375440 KIAA0232Q92628 1395 aa33.34■■■□□ 2.93
CUL4A-202ENST00000375440 ZBTB7BO15156 539 aaPredicted RBP33.33■■■□□ 2.93
CUL4A-202ENST00000375440 LTN1O94822 1766 aa33.33■■■□□ 2.93
CUL4A-202ENST00000375440 SMC5Q8IY18 1101 aa33.32■■■□□ 2.92
CUL4A-202ENST00000375440 RTL1A6NKG5 1358 aa33.31■■■□□ 2.92
CUL4A-202ENST00000375440 GAS2L2Q8NHY3 880 aa33.31■■■□□ 2.92
CUL4A-202ENST00000375440 NFAT5O94916 1531 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms