RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 KRT24Q2M2I5 525 aa21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 RWDD1Q9H446 243 aaPredicted RBP21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 ISY1Q9ULR0 285 aaKnown RBP21.61■■□□□ 1.05
LDLRAP1-201ENST00000374338 PUS7Q96PZ0 661 aaKnown RBP21.61■■□□□ 1.05
LDLRAP1-201ENST00000374338 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
LDLRAP1-201ENST00000374338 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
LDLRAP1-201ENST00000374338 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
LDLRAP1-201ENST00000374338 LNPKQ9C0E8 428 aa21.59■■□□□ 1.05
LDLRAP1-201ENST00000374338 ZFYVE9O95405 1425 aa21.59■■□□□ 1.05
LDLRAP1-201ENST00000374338 PPIP5K1Q6PFW1 1433 aa21.58■■□□□ 1.05
LDLRAP1-201ENST00000374338 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.05
LDLRAP1-201ENST00000374338 MAP7D2Q96T17 732 aa21.58■■□□□ 1.05
LDLRAP1-201ENST00000374338 OFD1O75665 1012 aa21.57■■□□□ 1.04
LDLRAP1-201ENST00000374338 GAS2L3Q86XJ1 694 aa21.57■■□□□ 1.04
LDLRAP1-201ENST00000374338 FAM13BQ9NYF5 915 aa21.57■■□□□ 1.04
LDLRAP1-201ENST00000374338 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 SMAP1Q8IYB5 467 aaPredicted RBP21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 RBM33Q96EV2 1170 aaKnown RBP21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 COG3Q96JB2 828 aa21.56■■□□□ 1.04
LDLRAP1-201ENST00000374338 FCHSD2O94868 740 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 CHMP5Q9NZZ3 219 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 NUTM2GQ5VZR2 741 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 FOXD4L1Q9NU39 408 aa21.55■■□□□ 1.04
LDLRAP1-201ENST00000374338 C8orf58Q8NAV2 365 aa21.54■■□□□ 1.04
LDLRAP1-201ENST00000374338 ARID3AQ99856 593 aa21.54■■□□□ 1.04
LDLRAP1-201ENST00000374338 TERF1P54274 439 aa21.54■■□□□ 1.04
LDLRAP1-201ENST00000374338 MBIPQ9NS73 344 aa21.54■■□□□ 1.04
LDLRAP1-201ENST00000374338 LTKP29376 864 aa21.53■■□□□ 1.04
LDLRAP1-201ENST00000374338 IL13P35225 146 aa21.53■■□□□ 1.04
LDLRAP1-201ENST00000374338 USP32Q8NFA0 1604 aa21.53■■□□□ 1.04
LDLRAP1-201ENST00000374338 MCM10Q7L590 875 aa21.52■■□□□ 1.04
LDLRAP1-201ENST00000374338 SULT6B1Q6IMI4 303 aa21.52■■□□□ 1.04
LDLRAP1-201ENST00000374338 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
LDLRAP1-201ENST00000374338 NFE2L2Q16236 605 aa21.52■■□□□ 1.03
LDLRAP1-201ENST00000374338 ZHX1Q9UKY1 873 aaPredicted RBP21.52■■□□□ 1.03
LDLRAP1-201ENST00000374338 HSP90AB2PQ58FF8 381 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 LRRC7Q96NW7 1537 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 DIP2BQ9P265 1576 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 APBB1O00213 710 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 C22orf23Q9BZE7 217 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 DDX19BQ9UMR2 479 aa21.51■■□□□ 1.03
LDLRAP1-201ENST00000374338 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
LDLRAP1-201ENST00000374338 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.5■■□□□ 1.03
LDLRAP1-201ENST00000374338 DDX11L8A8MPP1 907 aa21.5■■□□□ 1.03
LDLRAP1-201ENST00000374338 ZSCAN30Q86W11 494 aa21.5■■□□□ 1.03
LDLRAP1-201ENST00000374338 VAMP4O75379 141 aa21.49■■□□□ 1.03
LDLRAP1-201ENST00000374338 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
LDLRAP1-201ENST00000374338 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
LDLRAP1-201ENST00000374338 CPS1P31327 1500 aa21.49■■□□□ 1.03
LDLRAP1-201ENST00000374338 PNPLA6Q8IY17 1366 aa21.49■■□□□ 1.03
LDLRAP1-201ENST00000374338 ADGRB2O60241 1585 aa21.48■■□□□ 1.03
LDLRAP1-201ENST00000374338 FOXO3O43524 673 aa21.48■■□□□ 1.03
LDLRAP1-201ENST00000374338 ANKRD45Q5TZF3 282 aa21.48■■□□□ 1.03
LDLRAP1-201ENST00000374338 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
LDLRAP1-201ENST00000374338 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
LDLRAP1-201ENST00000374338 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.03
LDLRAP1-201ENST00000374338 ACEP12821 1306 aa21.45■■□□□ 1.03
LDLRAP1-201ENST00000374338 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
LDLRAP1-201ENST00000374338 PPP1R9BQ96SB3 815 aa21.45■■□□□ 1.02
LDLRAP1-201ENST00000374338 CCDC173Q0VFZ6 552 aa21.44■■□□□ 1.02
LDLRAP1-201ENST00000374338 EIF4A2Q14240 407 aaKnown RBP21.44■■□□□ 1.02
LDLRAP1-201ENST00000374338 IPO8O15397 1037 aaKnown RBP21.43■■□□□ 1.02
LDLRAP1-201ENST00000374338 MRPL50Q8N5N7 158 aaKnown RBP21.43■■□□□ 1.02
LDLRAP1-201ENST00000374338 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
LDLRAP1-201ENST00000374338 FAM135BQ49AJ0 1406 aa21.43■■□□□ 1.02
LDLRAP1-201ENST00000374338 MSNP26038 577 aaKnown RBP21.42■■□□□ 1.02
LDLRAP1-201ENST00000374338 TNPO1Q92973 898 aaKnown RBP21.42■■□□□ 1.02
LDLRAP1-201ENST00000374338 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
LDLRAP1-201ENST00000374338 KIF16BQ96L93 1317 aa21.42■■□□□ 1.02
LDLRAP1-201ENST00000374338 LTV1Q96GA3 475 aaPredicted RBP21.41■■□□□ 1.02
LDLRAP1-201ENST00000374338 BBXQ8WY36 941 aaPredicted RBP21.41■■□□□ 1.02
LDLRAP1-201ENST00000374338 HSCBQ8IWL3 235 aa21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 ZBTB7BO15156 539 aaPredicted RBP21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 IL16Q14005 1332 aa21.4■■□□□ 1.02
LDLRAP1-201ENST00000374338 UTP14CQ5TAP6 766 aaKnown RBP21.39■■□□□ 1.02
LDLRAP1-201ENST00000374338 TNRQ92752 1358 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 UQCRHLA0A096LP55 91 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 UQCRHP07919 91 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 MTERF4Q7Z6M4 381 aaKnown RBP21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 CT47B1P0C2W7 299 aaPredicted RBP21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 GNAI1P63096 354 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 DMTNQ08495 405 aa21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 HDAC1Q13547 482 aaPredicted RBP21.39■■□□□ 1.01
LDLRAP1-201ENST00000374338 CPSF1Q10570 1443 aaKnown RBP21.38■■□□□ 1.01
LDLRAP1-201ENST00000374338 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
LDLRAP1-201ENST00000374338 TTC21BQ7Z4L5 1316 aa21.38■■□□□ 1.01
LDLRAP1-201ENST00000374338 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
LDLRAP1-201ENST00000374338 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
LDLRAP1-201ENST00000374338 SMC5Q8IY18 1101 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms