RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
PRPF4-202ENST00000374199 RRP7AQ9Y3A4 280 aaKnown RBP16.4■□□□□ 0.22
PRPF4-202ENST00000374199 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
PRPF4-202ENST00000374199 PLIN1O60240 522 aa16.39■□□□□ 0.21
PRPF4-202ENST00000374199 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.38■□□□□ 0.21
PRPF4-202ENST00000374199 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
PRPF4-202ENST00000374199 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
PRPF4-202ENST00000374199 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
PRPF4-202ENST00000374199 AAMPQ13685 434 aa16.38■□□□□ 0.21
PRPF4-202ENST00000374199 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
PRPF4-202ENST00000374199 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 C1orf167Q5SNV9 1468 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
PRPF4-202ENST00000374199 BCAR3O75815 825 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 MAPK8IP3Q9UPT6 1336 aa16.37■□□□□ 0.21
PRPF4-202ENST00000374199 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
PRPF4-202ENST00000374199 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
PRPF4-202ENST00000374199 COL18A1P39060 1754 aa16.36■□□□□ 0.21
PRPF4-202ENST00000374199 CCDC136Q96JN2 1154 aa16.36■□□□□ 0.21
PRPF4-202ENST00000374199 RIPK4P57078 832 aa16.35■□□□□ 0.21
PRPF4-202ENST00000374199 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
PRPF4-202ENST00000374199 USP19O94966 1318 aa16.34■□□□□ 0.21
PRPF4-202ENST00000374199 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
PRPF4-202ENST00000374199 CRB1P82279 1406 aa16.34■□□□□ 0.21
PRPF4-202ENST00000374199 IFT57Q9NWB7 429 aa16.33■□□□□ 0.21
PRPF4-202ENST00000374199 PMFBP1Q8TBY8 1022 aa16.33■□□□□ 0.2
PRPF4-202ENST00000374199 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.2
PRPF4-202ENST00000374199 FAM208AQ9UK61 1670 aaKnown RBP16.33■□□□□ 0.2
PRPF4-202ENST00000374199 MYT1Q01538 1121 aa16.32■□□□□ 0.2
PRPF4-202ENST00000374199 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
PRPF4-202ENST00000374199 SIPA1L3O60292 1781 aaPredicted RBP16.3■□□□□ 0.2
PRPF4-202ENST00000374199 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
PRPF4-202ENST00000374199 CALD1Q05682 793 aaKnown RBP16.3■□□□□ 0.2
PRPF4-202ENST00000374199 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
PRPF4-202ENST00000374199 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
PRPF4-202ENST00000374199 PXDNQ92626 1479 aa16.3■□□□□ 0.2
PRPF4-202ENST00000374199 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
PRPF4-202ENST00000374199 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
PRPF4-202ENST00000374199 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
PRPF4-202ENST00000374199 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
PRPF4-202ENST00000374199 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
PRPF4-202ENST00000374199 HOXC9P31274 260 aa16.28■□□□□ 0.2
PRPF4-202ENST00000374199 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
PRPF4-202ENST00000374199 ABCA3Q99758 1704 aa16.28■□□□□ 0.2
PRPF4-202ENST00000374199 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
PRPF4-202ENST00000374199 HMOX1P09601 288 aa16.27■□□□□ 0.2
PRPF4-202ENST00000374199 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
PRPF4-202ENST00000374199 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
PRPF4-202ENST00000374199 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.19
PRPF4-202ENST00000374199 MS4A1P11836 297 aa16.26■□□□□ 0.19
PRPF4-202ENST00000374199 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
PRPF4-202ENST00000374199 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
PRPF4-202ENST00000374199 RGPD5Q99666 1765 aa16.26■□□□□ 0.19
PRPF4-202ENST00000374199 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
PRPF4-202ENST00000374199 MSH6P52701 1360 aa16.25■□□□□ 0.19
PRPF4-202ENST00000374199 CACNA1FO60840 1977 aa16.25■□□□□ 0.19
PRPF4-202ENST00000374199 RLBP1P12271 317 aa16.24■□□□□ 0.19
PRPF4-202ENST00000374199 GNAI1P63096 354 aa16.24■□□□□ 0.19
PRPF4-202ENST00000374199 OVOS2A0A0G2JMS6 1433 aa16.24■□□□□ 0.19
PRPF4-202ENST00000374199 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
PRPF4-202ENST00000374199 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
PRPF4-202ENST00000374199 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
PRPF4-202ENST00000374199 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
PRPF4-202ENST00000374199 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
PRPF4-202ENST00000374199 VAMP4O75379 141 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 CHL1O00533 1208 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 SULT6B1Q6IMI4 303 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 IP6K1Q92551 441 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 EYA1Q99502 592 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
PRPF4-202ENST00000374199 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
PRPF4-202ENST00000374199 RGS12O14924 1447 aa16.22■□□□□ 0.19
PRPF4-202ENST00000374199 NLRP6P59044 892 aa16.22■□□□□ 0.19
PRPF4-202ENST00000374199 KCNH5Q8NCM2 988 aa16.21■□□□□ 0.19
PRPF4-202ENST00000374199 CLUAP1Q96AJ1 413 aa16.21■□□□□ 0.19
PRPF4-202ENST00000374199 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
PRPF4-202ENST00000374199 ABTB2Q8N961 1025 aa16.21■□□□□ 0.18
PRPF4-202ENST00000374199 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
PRPF4-202ENST00000374199 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
PRPF4-202ENST00000374199 PARP4Q9UKK3 1724 aaKnown RBP16.2■□□□□ 0.18
PRPF4-202ENST00000374199 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
PRPF4-202ENST00000374199 NEFMP07197 916 aa16.2■□□□□ 0.18
PRPF4-202ENST00000374199 TRIM27P14373 513 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 MRPL50Q8N5N7 158 aaKnown RBP16.19■□□□□ 0.18
PRPF4-202ENST00000374199 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
PRPF4-202ENST00000374199 ABCC4O15439 1325 aa16.18■□□□□ 0.18
PRPF4-202ENST00000374199 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
PRPF4-202ENST00000374199 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
PRPF4-202ENST00000374199 TNS3Q68CZ2 1445 aa16.17■□□□□ 0.18
PRPF4-202ENST00000374199 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
PRPF4-202ENST00000374199 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms