RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.11□□□□□ -0.31
CSMD2-204ENST00000373380 MAP4K4O95819 1239 aaPredicted RBP13.1□□□□□ -0.31
CSMD2-204ENST00000373380 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
CSMD2-204ENST00000373380 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
CSMD2-204ENST00000373380 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
CSMD2-204ENST00000373380 FCHSD2O94868 740 aa13.1□□□□□ -0.31
CSMD2-204ENST00000373380 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
CSMD2-204ENST00000373380 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
CSMD2-204ENST00000373380 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 SLC52A1Q9NWF4 448 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 KDM5DQ9BY66 1539 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 TRIM29Q14134 588 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 WASHC4Q2M389 1173 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 MCM2P49736 904 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
CSMD2-204ENST00000373380 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
CSMD2-204ENST00000373380 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
CSMD2-204ENST00000373380 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
CSMD2-204ENST00000373380 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 IGHDP01880 384 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 ABCC2Q92887 1545 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 A2MP01023 1474 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 KDM4AO75164 1064 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
CSMD2-204ENST00000373380 PDE4CQ08493 712 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 EIF2AK4Q9P2K8 1649 aaKnown RBP13.07□□□□□ -0.32
CSMD2-204ENST00000373380 MARCH6O60337 910 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 ESPNB1AK53 854 aa13.07□□□□□ -0.32
CSMD2-204ENST00000373380 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
CSMD2-204ENST00000373380 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
CSMD2-204ENST00000373380 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
CSMD2-204ENST00000373380 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
CSMD2-204ENST00000373380 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
CSMD2-204ENST00000373380 CROCC2H7BZ55 1655 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 COL17A1Q9UMD9 1497 aaPredicted RBP13.06□□□□□ -0.32
CSMD2-204ENST00000373380 PSMA5P28066 241 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 SIL1Q9H173 461 aa13.06□□□□□ -0.32
CSMD2-204ENST00000373380 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
CSMD2-204ENST00000373380 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 SPC24Q8NBT2 197 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
CSMD2-204ENST00000373380 SRCIN1Q9C0H9 1055 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 SMARCA5O60264 1052 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-204ENST00000373380 TRIM27P14373 513 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
CSMD2-204ENST00000373380 MCM10Q7L590 875 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-204ENST00000373380 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
CSMD2-204ENST00000373380 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-204ENST00000373380 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
CSMD2-204ENST00000373380 STK3Q13188 491 aa13.04□□□□□ -0.32
CSMD2-204ENST00000373380 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
CSMD2-204ENST00000373380 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
CSMD2-204ENST00000373380 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-204ENST00000373380 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
CSMD2-204ENST00000373380 RTEL1-TNFRSF6BF6WH68 1400 aa13.04□□□□□ -0.32
CSMD2-204ENST00000373380 TPM1P09493 284 aa13.03□□□□□ -0.32
CSMD2-204ENST00000373380 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
CSMD2-204ENST00000373380 PDCP20941 246 aa13.03□□□□□ -0.32
CSMD2-204ENST00000373380 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
CSMD2-204ENST00000373380 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
CSMD2-204ENST00000373380 VPS53Q5VIR6 699 aa13.02□□□□□ -0.32
CSMD2-204ENST00000373380 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.32
CSMD2-204ENST00000373380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.02□□□□□ -0.32
CSMD2-204ENST00000373380 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
CSMD2-204ENST00000373380 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.32
CSMD2-204ENST00000373380 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.32
CSMD2-204ENST00000373380 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
CSMD2-204ENST00000373380 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
CSMD2-204ENST00000373380 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
CSMD2-204ENST00000373380 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.33
CSMD2-204ENST00000373380 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
CSMD2-204ENST00000373380 G3V3G9 751 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
CSMD2-204ENST00000373380 FANCAO15360 1455 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 ADGRL1O94910 1474 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 F6X3S4 739 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
CSMD2-204ENST00000373380 FBLN1P23142 703 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 VPS37DQ86XT2 251 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 NME9Q86XW9 330 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
CSMD2-204ENST00000373380 INSRP06213 1382 aa13□□□□□ -0.33
CSMD2-204ENST00000373380 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
CSMD2-204ENST00000373380 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
CSMD2-204ENST00000373380 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms