RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
NCDN-203ENST00000373253 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
NCDN-203ENST00000373253 SYNMO15061 1565 aa16.46■□□□□ 0.23
NCDN-203ENST00000373253 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.22
NCDN-203ENST00000373253 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.22
NCDN-203ENST00000373253 VAMP4O75379 141 aa16.45■□□□□ 0.22
NCDN-203ENST00000373253 IL13P35225 146 aa16.45■□□□□ 0.22
NCDN-203ENST00000373253 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
NCDN-203ENST00000373253 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
NCDN-203ENST00000373253 EXOC6BQ9Y2D4 811 aa16.44■□□□□ 0.22
NCDN-203ENST00000373253 ARAP3Q8WWN8 1544 aa16.44■□□□□ 0.22
NCDN-203ENST00000373253 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
NCDN-203ENST00000373253 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
NCDN-203ENST00000373253 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
NCDN-203ENST00000373253 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
NCDN-203ENST00000373253 NSD2O96028 1365 aa16.44■□□□□ 0.22
NCDN-203ENST00000373253 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
NCDN-203ENST00000373253 DDX17Q92841 729 aaKnown RBP16.43■□□□□ 0.22
NCDN-203ENST00000373253 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
NCDN-203ENST00000373253 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
NCDN-203ENST00000373253 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
NCDN-203ENST00000373253 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
NCDN-203ENST00000373253 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
NCDN-203ENST00000373253 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
NCDN-203ENST00000373253 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
NCDN-203ENST00000373253 INSRP06213 1382 aa16.41■□□□□ 0.22
NCDN-203ENST00000373253 EYA1Q99502 592 aa16.41■□□□□ 0.22
NCDN-203ENST00000373253 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
NCDN-203ENST00000373253 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
NCDN-203ENST00000373253 MEIS3Q99687 375 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 G2E3Q7L622 706 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 HDGFL1Q5TGJ6 251 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
NCDN-203ENST00000373253 ORAI2Q96SN7 254 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 SETD1BQ9UPS6 1966 aaKnown RBP16.39■□□□□ 0.21
NCDN-203ENST00000373253 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
NCDN-203ENST00000373253 GLI2P10070 1586 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
NCDN-203ENST00000373253 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
NCDN-203ENST00000373253 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
NCDN-203ENST00000373253 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
NCDN-203ENST00000373253 TULP4Q9NRJ4 1543 aa16.38■□□□□ 0.21
NCDN-203ENST00000373253 HSPA2P54652 639 aa16.38■□□□□ 0.21
NCDN-203ENST00000373253 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
NCDN-203ENST00000373253 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 OTUD7AQ8TE49 926 aaPredicted RBP16.37■□□□□ 0.21
NCDN-203ENST00000373253 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
NCDN-203ENST00000373253 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
NCDN-203ENST00000373253 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
NCDN-203ENST00000373253 HMMRO75330 724 aa16.36■□□□□ 0.21
NCDN-203ENST00000373253 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
NCDN-203ENST00000373253 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
NCDN-203ENST00000373253 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
NCDN-203ENST00000373253 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
NCDN-203ENST00000373253 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 MYL6BP14649 208 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 GSE1Q14687 1217 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
NCDN-203ENST00000373253 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
NCDN-203ENST00000373253 ATF3P18847 181 aa16.33■□□□□ 0.21
NCDN-203ENST00000373253 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.21
NCDN-203ENST00000373253 A2ML1A8K2U0 1454 aa16.33■□□□□ 0.21
NCDN-203ENST00000373253 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
NCDN-203ENST00000373253 KCNJ4P48050 445 aa16.33■□□□□ 0.2
NCDN-203ENST00000373253 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
NCDN-203ENST00000373253 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
NCDN-203ENST00000373253 UBTFL1P0CB47 393 aaPredicted RBP16.31■□□□□ 0.2
NCDN-203ENST00000373253 DTNBO60941 627 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 SIL1Q9H173 461 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 NUTM1Q86Y26 1132 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
NCDN-203ENST00000373253 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
NCDN-203ENST00000373253 CFAP74Q9C0B2 1584 aa16.29■□□□□ 0.2
NCDN-203ENST00000373253 ALKQ9UM73 1620 aa16.29■□□□□ 0.2
NCDN-203ENST00000373253 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
NCDN-203ENST00000373253 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
NCDN-203ENST00000373253 FLIIQ13045 1269 aa16.29■□□□□ 0.2
NCDN-203ENST00000373253 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
NCDN-203ENST00000373253 IL16Q14005 1332 aa16.29■□□□□ 0.2
NCDN-203ENST00000373253 VWDEQ8N2E2 1590 aa16.28■□□□□ 0.2
NCDN-203ENST00000373253 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms