RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DLG5Q8TDM6 1919 aa23.93■■□□□ 1.42
USP49-202ENST00000373010 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
USP49-202ENST00000373010 ITPRIPQ8IWB1 547 aa23.93■■□□□ 1.42
USP49-202ENST00000373010 PDZRN3Q9UPQ7 1066 aa23.93■■□□□ 1.42
USP49-202ENST00000373010 VIRMAQ69YN4 1812 aaKnown RBP23.93■■□□□ 1.42
USP49-202ENST00000373010 SLIT1O75093 1534 aa23.92■■□□□ 1.42
USP49-202ENST00000373010 ARHGAP23Q9P227 1491 aa23.92■■□□□ 1.42
USP49-202ENST00000373010 TMEM57Q8N5G2 664 aa23.9■■□□□ 1.42
USP49-202ENST00000373010 USP6P35125 1406 aa23.9■■□□□ 1.42
USP49-202ENST00000373010 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
USP49-202ENST00000373010 KIF16BQ96L93 1317 aa23.9■■□□□ 1.42
USP49-202ENST00000373010 DDX19BQ9UMR2 479 aa23.89■■□□□ 1.42
USP49-202ENST00000373010 OVOS2A0A0J9YW53 1432 aa23.88■■□□□ 1.41
USP49-202ENST00000373010 OVOS2Q6IE36 1432 aa23.88■■□□□ 1.41
USP49-202ENST00000373010 CALD1Q05682 793 aaKnown RBP23.88■■□□□ 1.41
USP49-202ENST00000373010 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
USP49-202ENST00000373010 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
USP49-202ENST00000373010 TSPYL6Q8N831 410 aa23.88■■□□□ 1.41
USP49-202ENST00000373010 FAM83GA6ND36 823 aa23.87■■□□□ 1.41
USP49-202ENST00000373010 IPO8O15397 1037 aaKnown RBP23.87■■□□□ 1.41
USP49-202ENST00000373010 GNAI1P63096 354 aa23.87■■□□□ 1.41
USP49-202ENST00000373010 AEBP1Q8IUX7 1158 aa23.87■■□□□ 1.41
USP49-202ENST00000373010 MBIPQ9NS73 344 aa23.87■■□□□ 1.41
USP49-202ENST00000373010 IFT57Q9NWB7 429 aa23.87■■□□□ 1.41
USP49-202ENST00000373010 VAMP4O75379 141 aa23.86■■□□□ 1.41
USP49-202ENST00000373010 ZNF853P0CG23 659 aa23.86■■□□□ 1.41
USP49-202ENST00000373010 SLC4A3P48751 1232 aa23.86■■□□□ 1.41
USP49-202ENST00000373010 SOX12O15370 315 aa23.85■■□□□ 1.41
USP49-202ENST00000373010 ELL2O00472 640 aaPredicted RBP23.85■■□□□ 1.41
USP49-202ENST00000373010 THEMISQ8N1K5 641 aaPredicted RBP23.85■■□□□ 1.41
USP49-202ENST00000373010 DCTN1Q14203 1278 aa23.84■■□□□ 1.41
USP49-202ENST00000373010 RGPD8O14715 1765 aaPredicted RBP23.84■■□□□ 1.41
USP49-202ENST00000373010 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
USP49-202ENST00000373010 SEC24BO95487 1268 aa23.84■■□□□ 1.41
USP49-202ENST00000373010 SULT6B1Q6IMI4 303 aa23.84■■□□□ 1.41
USP49-202ENST00000373010 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
USP49-202ENST00000373010 LMOD3Q0VAK6 560 aa23.83■■□□□ 1.41
USP49-202ENST00000373010 PTCH1Q13635 1447 aa23.83■■□□□ 1.4
USP49-202ENST00000373010 HSP90AB2PQ58FF8 381 aa23.82■■□□□ 1.4
USP49-202ENST00000373010 ZNF428Q96B54 188 aa23.82■■□□□ 1.4
USP49-202ENST00000373010 ZBTB40Q9NUA8 1239 aa23.82■■□□□ 1.4
USP49-202ENST00000373010 SSH2Q76I76 1423 aa23.82■■□□□ 1.4
USP49-202ENST00000373010 MRPL50Q8N5N7 158 aaKnown RBP23.82■■□□□ 1.4
USP49-202ENST00000373010 DIP2AQ14689 1571 aa23.81■■□□□ 1.4
USP49-202ENST00000373010 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
USP49-202ENST00000373010 USP19O94966 1318 aa23.81■■□□□ 1.4
USP49-202ENST00000373010 BRPF1P55201 1214 aaPredicted RBP23.81■■□□□ 1.4
USP49-202ENST00000373010 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
USP49-202ENST00000373010 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
USP49-202ENST00000373010 C8orf58Q8NAV2 365 aa23.8■■□□□ 1.4
USP49-202ENST00000373010 TRHP20396 242 aaPredicted RBP23.79■■□□□ 1.4
USP49-202ENST00000373010 TWISTNBQ3B726 338 aaPredicted RBP23.78■■□□□ 1.4
USP49-202ENST00000373010 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
USP49-202ENST00000373010 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
USP49-202ENST00000373010 XRN1Q8IZH2 1706 aaKnown RBP23.77■■□□□ 1.4
USP49-202ENST00000373010 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
USP49-202ENST00000373010 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
USP49-202ENST00000373010 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
USP49-202ENST00000373010 RGPD1P0DJD0 1748 aa23.75■■□□□ 1.39
USP49-202ENST00000373010 KCNA6P17658 529 aa23.75■■□□□ 1.39
USP49-202ENST00000373010 SMC5Q8IY18 1101 aa23.73■■□□□ 1.39
USP49-202ENST00000373010 ARHGAP45Q92619 1136 aa23.73■■□□□ 1.39
USP49-202ENST00000373010 MCM10Q7L590 875 aa23.72■■□□□ 1.39
USP49-202ENST00000373010 FMN2Q9NZ56 1722 aa23.72■■□□□ 1.39
USP49-202ENST00000373010 PIK3C2AO00443 1686 aa23.71■■□□□ 1.39
USP49-202ENST00000373010 ZBTB7BO15156 539 aaPredicted RBP23.71■■□□□ 1.39
USP49-202ENST00000373010 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
USP49-202ENST00000373010 PIK3R4Q99570 1358 aa23.7■■□□□ 1.39
USP49-202ENST00000373010 CEP170BQ9Y4F5 1589 aaPredicted RBP23.7■■□□□ 1.39
USP49-202ENST00000373010 KRT24Q2M2I5 525 aa23.69■■□□□ 1.38
USP49-202ENST00000373010 C1orf115Q9H7X2 142 aa23.69■■□□□ 1.38
USP49-202ENST00000373010 ABCC4O15439 1325 aa23.69■■□□□ 1.38
USP49-202ENST00000373010 RIMS1Q86UR5 1692 aaKnown RBP23.68■■□□□ 1.38
USP49-202ENST00000373010 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
USP49-202ENST00000373010 FLT4P35916 1363 aa23.67■■□□□ 1.38
USP49-202ENST00000373010 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
USP49-202ENST00000373010 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
USP49-202ENST00000373010 CHL1O00533 1208 aa23.67■■□□□ 1.38
USP49-202ENST00000373010 AMPHP49418 695 aa23.67■■□□□ 1.38
USP49-202ENST00000373010 FOXO3O43524 673 aa23.65■■□□□ 1.38
USP49-202ENST00000373010 NLRP6P59044 892 aa23.65■■□□□ 1.38
USP49-202ENST00000373010 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
USP49-202ENST00000373010 NUCB1Q02818 461 aa23.64■■□□□ 1.38
USP49-202ENST00000373010 API5Q9BZZ5 524 aaKnown RBP23.64■■□□□ 1.37
USP49-202ENST00000373010 MTHFSDQ2M296 383 aaKnown RBP23.63■■□□□ 1.37
USP49-202ENST00000373010 EYA1Q99502 592 aa23.63■■□□□ 1.37
USP49-202ENST00000373010 LNPKQ9C0E8 428 aa23.63■■□□□ 1.37
USP49-202ENST00000373010 UPF2Q9HAU5 1272 aaKnown RBP23.63■■□□□ 1.37
USP49-202ENST00000373010 CHMP4BQ9H444 224 aaKnown RBP23.62■■□□□ 1.37
USP49-202ENST00000373010 CRB1P82279 1406 aa23.62■■□□□ 1.37
USP49-202ENST00000373010 TBC1D32Q96NH3 1257 aa23.62■■□□□ 1.37
USP49-202ENST00000373010 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
USP49-202ENST00000373010 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
USP49-202ENST00000373010 MIS18AQ9NYP9 233 aa23.61■■□□□ 1.37
USP49-202ENST00000373010 CHD1LQ86WJ1 897 aa23.6■■□□□ 1.37
USP49-202ENST00000373010 SIRT2Q8IXJ6 389 aa23.6■■□□□ 1.37
USP49-202ENST00000373010 KDRP35968 1356 aa23.6■■□□□ 1.37
USP49-202ENST00000373010 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
USP49-202ENST00000373010 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
USP49-202ENST00000373010 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms