RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 PROSER2Q86WR7 435 aaPredicted RBP17.24■□□□□ 0.35
CSTF2-201ENST00000372972 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
CSTF2-201ENST00000372972 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
CSTF2-201ENST00000372972 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
CSTF2-201ENST00000372972 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
CSTF2-201ENST00000372972 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
CSTF2-201ENST00000372972 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
CSTF2-201ENST00000372972 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
CSTF2-201ENST00000372972 RLBP1P12271 317 aa17.2■□□□□ 0.34
CSTF2-201ENST00000372972 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
CSTF2-201ENST00000372972 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
CSTF2-201ENST00000372972 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
CSTF2-201ENST00000372972 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
CSTF2-201ENST00000372972 IGHDP01880 384 aa17.19■□□□□ 0.34
CSTF2-201ENST00000372972 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
CSTF2-201ENST00000372972 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
CSTF2-201ENST00000372972 PIK3C2AO00443 1686 aa17.18■□□□□ 0.34
CSTF2-201ENST00000372972 ESCO1Q5FWF5 840 aa17.18■□□□□ 0.34
CSTF2-201ENST00000372972 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
CSTF2-201ENST00000372972 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
CSTF2-201ENST00000372972 EIF4A2Q14240 407 aaKnown RBP17.17■□□□□ 0.34
CSTF2-201ENST00000372972 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
CSTF2-201ENST00000372972 GNAI1P63096 354 aa17.16■□□□□ 0.34
CSTF2-201ENST00000372972 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
CSTF2-201ENST00000372972 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
CSTF2-201ENST00000372972 FTSJ3Q8IY81 847 aaKnown RBP17.16■□□□□ 0.34
CSTF2-201ENST00000372972 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
CSTF2-201ENST00000372972 IFT57Q9NWB7 429 aa17.15■□□□□ 0.34
CSTF2-201ENST00000372972 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
CSTF2-201ENST00000372972 SOX12O15370 315 aa17.15■□□□□ 0.34
CSTF2-201ENST00000372972 NLRP6P59044 892 aa17.15■□□□□ 0.34
CSTF2-201ENST00000372972 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
CSTF2-201ENST00000372972 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
CSTF2-201ENST00000372972 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
CSTF2-201ENST00000372972 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
CSTF2-201ENST00000372972 ORAI2Q96SN7 254 aa17.14■□□□□ 0.33
CSTF2-201ENST00000372972 STRCQ7RTU9 1775 aa17.14■□□□□ 0.33
CSTF2-201ENST00000372972 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
CSTF2-201ENST00000372972 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 TRIM27P14373 513 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
CSTF2-201ENST00000372972 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
CSTF2-201ENST00000372972 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
CSTF2-201ENST00000372972 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 KIF16BQ96L93 1317 aa17.13■□□□□ 0.33
CSTF2-201ENST00000372972 PSME1Q06323 249 aa17.12■□□□□ 0.33
CSTF2-201ENST00000372972 MARF1Q9Y4F3 1742 aaKnown RBP17.12■□□□□ 0.33
CSTF2-201ENST00000372972 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
CSTF2-201ENST00000372972 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
CSTF2-201ENST00000372972 USP54Q70EL1 1684 aa17.11■□□□□ 0.33
CSTF2-201ENST00000372972 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
CSTF2-201ENST00000372972 RGS3P49796 1198 aa17.11■□□□□ 0.33
CSTF2-201ENST00000372972 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
CSTF2-201ENST00000372972 MYT1Q01538 1121 aa17.1■□□□□ 0.33
CSTF2-201ENST00000372972 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
CSTF2-201ENST00000372972 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
CSTF2-201ENST00000372972 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
CSTF2-201ENST00000372972 VAMP4O75379 141 aa17.09■□□□□ 0.33
CSTF2-201ENST00000372972 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
CSTF2-201ENST00000372972 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
CSTF2-201ENST00000372972 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
CSTF2-201ENST00000372972 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
CSTF2-201ENST00000372972 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
CSTF2-201ENST00000372972 FOXO3O43524 673 aa17.08■□□□□ 0.33
CSTF2-201ENST00000372972 ATF3P18847 181 aa17.08■□□□□ 0.33
CSTF2-201ENST00000372972 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.33
CSTF2-201ENST00000372972 FLT4P35916 1363 aa17.08■□□□□ 0.32
CSTF2-201ENST00000372972 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
CSTF2-201ENST00000372972 AMPHP49418 695 aa17.07■□□□□ 0.32
CSTF2-201ENST00000372972 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
CSTF2-201ENST00000372972 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
CSTF2-201ENST00000372972 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 DCCP43146 1447 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 MST1RQ04912 1400 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 C8orf34Q49A92 452 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
CSTF2-201ENST00000372972 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
CSTF2-201ENST00000372972 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
CSTF2-201ENST00000372972 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
CSTF2-201ENST00000372972 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
CSTF2-201ENST00000372972 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
CSTF2-201ENST00000372972 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
CSTF2-201ENST00000372972 KIF24Q5T7B8 1368 aa17.03■□□□□ 0.32
CSTF2-201ENST00000372972 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
CSTF2-201ENST00000372972 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
CSTF2-201ENST00000372972 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
CSTF2-201ENST00000372972 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms