RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ZNF428Q96B54 188 aa26.27■■□□□ 1.8
VEGFA-204ENST00000372064 TTC21BQ7Z4L5 1316 aa26.27■■□□□ 1.8
VEGFA-204ENST00000372064 SLIT1O75093 1534 aa26.26■■□□□ 1.79
VEGFA-204ENST00000372064 BRPF1P55201 1214 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-204ENST00000372064 DDX19BQ9UMR2 479 aa26.26■■□□□ 1.79
VEGFA-204ENST00000372064 CALD1Q05682 793 aaKnown RBP26.25■■□□□ 1.79
VEGFA-204ENST00000372064 ARHGAP23Q9P227 1491 aa26.25■■□□□ 1.79
VEGFA-204ENST00000372064 PLEKHG3A1L390 1219 aa26.25■■□□□ 1.79
VEGFA-204ENST00000372064 AMOTL2Q9Y2J4 779 aa26.25■■□□□ 1.79
VEGFA-204ENST00000372064 PDZRN3Q9UPQ7 1066 aa26.24■■□□□ 1.79
VEGFA-204ENST00000372064 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
VEGFA-204ENST00000372064 OVOS2Q6IE36 1432 aa26.22■■□□□ 1.79
VEGFA-204ENST00000372064 IPO8O15397 1037 aaKnown RBP26.22■■□□□ 1.79
VEGFA-204ENST00000372064 IFT57Q9NWB7 429 aa26.22■■□□□ 1.79
VEGFA-204ENST00000372064 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
VEGFA-204ENST00000372064 HDAC1Q13547 482 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-204ENST00000372064 ITPRIPQ8IWB1 547 aa26.21■■□□□ 1.79
VEGFA-204ENST00000372064 ZNF853P0CG23 659 aa26.21■■□□□ 1.79
VEGFA-204ENST00000372064 DLG5Q8TDM6 1919 aa26.21■■□□□ 1.79
VEGFA-204ENST00000372064 USP19O94966 1318 aa26.21■■□□□ 1.79
VEGFA-204ENST00000372064 TBX22Q9Y458 520 aa26.2■■□□□ 1.79
VEGFA-204ENST00000372064 USP6P35125 1406 aa26.2■■□□□ 1.78
VEGFA-204ENST00000372064 TMEM57Q8N5G2 664 aa26.19■■□□□ 1.78
VEGFA-204ENST00000372064 GNAI1P63096 354 aa26.19■■□□□ 1.78
VEGFA-204ENST00000372064 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
VEGFA-204ENST00000372064 PTCH1Q13635 1447 aa26.17■■□□□ 1.78
VEGFA-204ENST00000372064 ZBTB40Q9NUA8 1239 aa26.17■■□□□ 1.78
VEGFA-204ENST00000372064 SSH2Q76I76 1423 aa26.17■■□□□ 1.78
VEGFA-204ENST00000372064 EIF4A2Q14240 407 aaKnown RBP26.17■■□□□ 1.78
VEGFA-204ENST00000372064 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-204ENST00000372064 FER1L4A9Z1Z3 1794 aa26.16■■□□□ 1.78
VEGFA-204ENST00000372064 VAMP4O75379 141 aa26.16■■□□□ 1.78
VEGFA-204ENST00000372064 RTL5Q5HYW3 569 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-204ENST00000372064 TSPYL6Q8N831 410 aa26.16■■□□□ 1.78
VEGFA-204ENST00000372064 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
VEGFA-204ENST00000372064 AEBP1Q8IUX7 1158 aa26.15■■□□□ 1.78
VEGFA-204ENST00000372064 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
VEGFA-204ENST00000372064 FAM83GA6ND36 823 aa26.15■■□□□ 1.78
VEGFA-204ENST00000372064 USP31Q70CQ4 1352 aa26.15■■□□□ 1.78
VEGFA-204ENST00000372064 SEC24BO95487 1268 aa26.14■■□□□ 1.77
VEGFA-204ENST00000372064 USP35Q9P2H5 1018 aa26.14■■□□□ 1.77
VEGFA-204ENST00000372064 PEAK1Q9H792 1746 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 ARHGAP45Q92619 1136 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 CFAP44Q96MT7 982 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 PIK3R4Q99570 1358 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 SOX12O15370 315 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 SULT6B1Q6IMI4 303 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 MRPL50Q8N5N7 158 aaKnown RBP26.13■■□□□ 1.77
VEGFA-204ENST00000372064 RGPD1P0DJD0 1748 aa26.13■■□□□ 1.77
VEGFA-204ENST00000372064 ELL2O00472 640 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-204ENST00000372064 DCTN1Q14203 1278 aa26.12■■□□□ 1.77
VEGFA-204ENST00000372064 DEKP35659 375 aaKnown RBP26.12■■□□□ 1.77
VEGFA-204ENST00000372064 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
VEGFA-204ENST00000372064 SMC5Q8IY18 1101 aa26.11■■□□□ 1.77
VEGFA-204ENST00000372064 SLC4A3P48751 1232 aa26.11■■□□□ 1.77
VEGFA-204ENST00000372064 DAXXQ9UER7 740 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-204ENST00000372064 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-204ENST00000372064 RIMS1Q86UR5 1692 aaKnown RBP26.08■■□□□ 1.77
VEGFA-204ENST00000372064 XRN1Q8IZH2 1706 aaKnown RBP26.08■■□□□ 1.77
VEGFA-204ENST00000372064 TWISTNBQ3B726 338 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-204ENST00000372064 C8orf58Q8NAV2 365 aa26.07■■□□□ 1.76
VEGFA-204ENST00000372064 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
VEGFA-204ENST00000372064 TTC21AQ8NDW8 1320 aa26.07■■□□□ 1.76
VEGFA-204ENST00000372064 KCNA6P17658 529 aa26.04■■□□□ 1.76
VEGFA-204ENST00000372064 ABCC4O15439 1325 aa26.04■■□□□ 1.76
VEGFA-204ENST00000372064 MAP3K19Q56UN5 1328 aa26.04■■□□□ 1.76
VEGFA-204ENST00000372064 ZBTB7BO15156 539 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-204ENST00000372064 CHMP4BQ9H444 224 aaKnown RBP26.03■■□□□ 1.76
VEGFA-204ENST00000372064 FMN2Q9NZ56 1722 aa26.03■■□□□ 1.76
VEGFA-204ENST00000372064 RGPD8O14715 1765 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-204ENST00000372064 TBC1D32Q96NH3 1257 aa26.01■■□□□ 1.75
VEGFA-204ENST00000372064 ARHGEF10O15013 1369 aa26■■□□□ 1.75
VEGFA-204ENST00000372064 NUCB1Q02818 461 aa25.99■■□□□ 1.75
VEGFA-204ENST00000372064 MCM10Q7L590 875 aa25.99■■□□□ 1.75
VEGFA-204ENST00000372064 UPF2Q9HAU5 1272 aaKnown RBP25.99■■□□□ 1.75
VEGFA-204ENST00000372064 PIK3C2AO00443 1686 aa25.99■■□□□ 1.75
VEGFA-204ENST00000372064 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
VEGFA-204ENST00000372064 SBNO1A3KN83 1393 aa25.97■■□□□ 1.75
VEGFA-204ENST00000372064 CHL1O00533 1208 aa25.96■■□□□ 1.75
VEGFA-204ENST00000372064 CEP170BQ9Y4F5 1589 aaPredicted RBP25.96■■□□□ 1.75
VEGFA-204ENST00000372064 API5Q9BZZ5 524 aaKnown RBP25.96■■□□□ 1.75
VEGFA-204ENST00000372064 FLT4P35916 1363 aa25.96■■□□□ 1.75
VEGFA-204ENST00000372064 KIF24Q5T7B8 1368 aa25.96■■□□□ 1.75
VEGFA-204ENST00000372064 KRT24Q2M2I5 525 aa25.95■■□□□ 1.75
VEGFA-204ENST00000372064 KIAA0232Q92628 1395 aa25.95■■□□□ 1.74
VEGFA-204ENST00000372064 USP54Q70EL1 1684 aa25.94■■□□□ 1.74
VEGFA-204ENST00000372064 AMPHP49418 695 aa25.94■■□□□ 1.74
VEGFA-204ENST00000372064 C1orf115Q9H7X2 142 aa25.94■■□□□ 1.74
VEGFA-204ENST00000372064 NLRP6P59044 892 aa25.94■■□□□ 1.74
VEGFA-204ENST00000372064 NFKBIBQ15653 356 aa25.94■■□□□ 1.74
VEGFA-204ENST00000372064 KDRP35968 1356 aa25.93■■□□□ 1.74
VEGFA-204ENST00000372064 CRB1P82279 1406 aa25.93■■□□□ 1.74
VEGFA-204ENST00000372064 BECN1Q14457 450 aa25.93■■□□□ 1.74
VEGFA-204ENST00000372064 GCC1Q96CN9 775 aa25.92■■□□□ 1.74
VEGFA-204ENST00000372064 HAP1P54257 671 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-204ENST00000372064 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
VEGFA-204ENST00000372064 CHD1LQ86WJ1 897 aa25.92■■□□□ 1.74
VEGFA-204ENST00000372064 FOXO3O43524 673 aa25.91■■□□□ 1.74
VEGFA-204ENST00000372064 MARF1Q9Y4F3 1742 aaKnown RBP25.91■■□□□ 1.74
VEGFA-204ENST00000372064 EYA1Q99502 592 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms