RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IPO8O15397 1037 aaKnown RBP14.9□□□□□ -0.02
PDE6C-201ENST00000371447 NLRP6P59044 892 aa14.9□□□□□ -0.02
PDE6C-201ENST00000371447 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
PDE6C-201ENST00000371447 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
PDE6C-201ENST00000371447 NLRP1Q9C000 1473 aa14.88□□□□□ -0.03
PDE6C-201ENST00000371447 KCNA6P17658 529 aa14.88□□□□□ -0.03
PDE6C-201ENST00000371447 ANKRD45Q5TZF3 282 aa14.88□□□□□ -0.03
PDE6C-201ENST00000371447 VAMP4O75379 141 aa14.87□□□□□ -0.03
PDE6C-201ENST00000371447 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
PDE6C-201ENST00000371447 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
PDE6C-201ENST00000371447 GNAI1P63096 354 aa14.87□□□□□ -0.03
PDE6C-201ENST00000371447 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
PDE6C-201ENST00000371447 SLC4A10Q6U841 1118 aa14.87□□□□□ -0.03
PDE6C-201ENST00000371447 CPS1P31327 1500 aa14.86□□□□□ -0.03
PDE6C-201ENST00000371447 ARXQ96QS3 562 aa14.86□□□□□ -0.03
PDE6C-201ENST00000371447 KIF16BQ96L93 1317 aa14.85□□□□□ -0.03
PDE6C-201ENST00000371447 EDC4Q6P2E9 1401 aaKnown RBP14.85□□□□□ -0.03
PDE6C-201ENST00000371447 ABTB2Q8N961 1025 aa14.85□□□□□ -0.03
PDE6C-201ENST00000371447 PNPLA6Q8IY17 1366 aa14.84□□□□□ -0.03
PDE6C-201ENST00000371447 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
PDE6C-201ENST00000371447 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
PDE6C-201ENST00000371447 ZNF428Q96B54 188 aa14.83□□□□□ -0.04
PDE6C-201ENST00000371447 MAP3K19Q56UN5 1328 aa14.83□□□□□ -0.04
PDE6C-201ENST00000371447 RTF1Q92541 710 aaKnown RBP14.83□□□□□ -0.04
PDE6C-201ENST00000371447 ZBTB40Q9NUA8 1239 aa14.82□□□□□ -0.04
PDE6C-201ENST00000371447 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
PDE6C-201ENST00000371447 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
PDE6C-201ENST00000371447 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
PDE6C-201ENST00000371447 MRPL50Q8N5N7 158 aaKnown RBP14.82□□□□□ -0.04
PDE6C-201ENST00000371447 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
PDE6C-201ENST00000371447 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 AGLP35573 1532 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 CPSF1Q10570 1443 aaKnown RBP14.81□□□□□ -0.04
PDE6C-201ENST00000371447 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 F6X3S4 739 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 IL16Q14005 1332 aa14.81□□□□□ -0.04
PDE6C-201ENST00000371447 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
PDE6C-201ENST00000371447 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
PDE6C-201ENST00000371447 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
PDE6C-201ENST00000371447 TSPYL4Q9UJ04 414 aa14.8□□□□□ -0.04
PDE6C-201ENST00000371447 ADAMTS13Q76LX8 1427 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 ESCO1Q5FWF5 840 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 FAM135BQ49AJ0 1406 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 ATP7BP35670 1465 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 USP19O94966 1318 aa14.79□□□□□ -0.04
PDE6C-201ENST00000371447 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
PDE6C-201ENST00000371447 EYA1Q99502 592 aa14.78□□□□□ -0.04
PDE6C-201ENST00000371447 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
PDE6C-201ENST00000371447 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.04
PDE6C-201ENST00000371447 ZBTB7BO15156 539 aaPredicted RBP14.77□□□□□ -0.04
PDE6C-201ENST00000371447 MAP2P11137 1827 aaKnown RBP14.77□□□□□ -0.05
PDE6C-201ENST00000371447 USP32Q8NFA0 1604 aa14.76□□□□□ -0.05
PDE6C-201ENST00000371447 PLEKHG3A1L390 1219 aa14.76□□□□□ -0.05
PDE6C-201ENST00000371447 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
PDE6C-201ENST00000371447 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
PDE6C-201ENST00000371447 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
PDE6C-201ENST00000371447 PSME1Q06323 249 aa14.76□□□□□ -0.05
PDE6C-201ENST00000371447 G2E3Q7L622 706 aa14.75□□□□□ -0.05
PDE6C-201ENST00000371447 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
PDE6C-201ENST00000371447 BECN1Q14457 450 aa14.75□□□□□ -0.05
PDE6C-201ENST00000371447 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
PDE6C-201ENST00000371447 PODXL2Q9NZ53 605 aa14.75□□□□□ -0.05
PDE6C-201ENST00000371447 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
PDE6C-201ENST00000371447 HDAC1Q13547 482 aaPredicted RBP14.74□□□□□ -0.05
PDE6C-201ENST00000371447 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
PDE6C-201ENST00000371447 TBX22Q9Y458 520 aa14.74□□□□□ -0.05
PDE6C-201ENST00000371447 MED14O60244 1454 aa14.73□□□□□ -0.05
PDE6C-201ENST00000371447 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
PDE6C-201ENST00000371447 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
PDE6C-201ENST00000371447 USP6P35125 1406 aa14.73□□□□□ -0.05
PDE6C-201ENST00000371447 MEIS3Q99687 375 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
PDE6C-201ENST00000371447 SMC5Q8IY18 1101 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 NRXN3Q9Y4C0 1643 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 AAMPQ13685 434 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 OTUD7AQ8TE49 926 aaPredicted RBP14.72□□□□□ -0.05
PDE6C-201ENST00000371447 LRRC59Q96AG4 307 aaKnown RBP14.72□□□□□ -0.05
PDE6C-201ENST00000371447 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
PDE6C-201ENST00000371447 ADGRB2O60241 1585 aa14.71□□□□□ -0.05
PDE6C-201ENST00000371447 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.05
PDE6C-201ENST00000371447 DLC1Q96QB1 1528 aa14.71□□□□□ -0.05
PDE6C-201ENST00000371447 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.05
PDE6C-201ENST00000371447 NUCB1Q02818 461 aa14.71□□□□□ -0.05
PDE6C-201ENST00000371447 FKBP5Q13451 457 aaPredicted RBP14.71□□□□□ -0.06
PDE6C-201ENST00000371447 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.06
PDE6C-201ENST00000371447 ANKLE2Q86XL3 938 aa14.71□□□□□ -0.06
PDE6C-201ENST00000371447 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.06
PDE6C-201ENST00000371447 ORAI2Q96SN7 254 aa14.71□□□□□ -0.06
PDE6C-201ENST00000371447 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
PDE6C-201ENST00000371447 ANXA1P04083 346 aa14.7□□□□□ -0.06
PDE6C-201ENST00000371447 CHL1O00533 1208 aa14.69□□□□□ -0.06
PDE6C-201ENST00000371447 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
PDE6C-201ENST00000371447 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
PDE6C-201ENST00000371447 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
PDE6C-201ENST00000371447 GZF1Q9H116 711 aaPredicted RBP14.69□□□□□ -0.06
PDE6C-201ENST00000371447 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
PDE6C-201ENST00000371447 HOXC9P31274 260 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms