RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ORAI2Q96SN7 254 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 RTN4Q9NQC3 1192 aaKnown RBP8.82□□□□□ -1
TGFBR3-202ENST00000370399 NEXNQ0ZGT2 675 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 LRRC59Q96AG4 307 aaKnown RBP8.82□□□□□ -1
TGFBR3-202ENST00000370399 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
TGFBR3-202ENST00000370399 MYL6BP14649 208 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
TGFBR3-202ENST00000370399 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
TGFBR3-202ENST00000370399 C22orf23Q9BZE7 217 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 CROCC2H7BZ55 1655 aa8.82□□□□□ -1
TGFBR3-202ENST00000370399 BTBD11A6QL63 1104 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 MCCP23508 829 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 TATP17735 454 aaPredicted RBP8.81□□□□□ -1
TGFBR3-202ENST00000370399 AAMPQ13685 434 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 HECW2Q9P2P5 1572 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 TRIM35Q9UPQ4 493 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 CLTCL1P53675 1640 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 SHROOM2Q13796 1616 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 ABCC11Q96J66 1382 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 ABCC3O15438 1527 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 SBNO2Q9Y2G9 1366 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 MTHFSDQ2M296 383 aaKnown RBP8.81□□□□□ -1
TGFBR3-202ENST00000370399 TAF7LQ5H9L4 462 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 EYA1Q99502 592 aa8.81□□□□□ -1
TGFBR3-202ENST00000370399 EXOC6BQ9Y2D4 811 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 CCDC27Q2M243 656 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 GORABQ5T7V8 394 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 CHD1LQ86WJ1 897 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 ARAP3Q8WWN8 1544 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 EIF5BO60841 1220 aaKnown RBP8.8□□□□□ -1
TGFBR3-202ENST00000370399 DDX58O95786 925 aaKnown RBP8.8□□□□□ -1
TGFBR3-202ENST00000370399 IL13P35225 146 aa8.8□□□□□ -1
TGFBR3-202ENST00000370399 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
TGFBR3-202ENST00000370399 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
TGFBR3-202ENST00000370399 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
TGFBR3-202ENST00000370399 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
TGFBR3-202ENST00000370399 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
TGFBR3-202ENST00000370399 ALDH1L2Q3SY69 923 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 IL1RAPL2Q9NP60 686 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 ANO2Q9NQ90 1003 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 GNAI2P04899 355 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 GNAI3P08754 354 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 UNC13BO14795 1591 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
TGFBR3-202ENST00000370399 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
TGFBR3-202ENST00000370399 VAMP4O75379 141 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 HDAC5Q9UQL6 1122 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 NUTM2BA6NNL0 878 aaPredicted RBP8.78□□□□□ -1
TGFBR3-202ENST00000370399 NUTM2EB1AL46 878 aaPredicted RBP8.78□□□□□ -1
TGFBR3-202ENST00000370399 NUTM2AQ8IVF1 878 aaPredicted RBP8.78□□□□□ -1
TGFBR3-202ENST00000370399 MYOM2P54296 1465 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 TET3O43151 1660 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 PRR36Q9H6K5 1346 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 GCC1Q96CN9 775 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 SRCIN1Q9C0H9 1055 aa8.78□□□□□ -1
TGFBR3-202ENST00000370399 RNF123Q5XPI4 1314 aa8.77□□□□□ -1
TGFBR3-202ENST00000370399 ROBO2Q9HCK4 1378 aa8.77□□□□□ -1
TGFBR3-202ENST00000370399 CABP4P57796 275 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 TTC21AQ8NDW8 1320 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 GPATCH3Q96I76 525 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 RBM42Q9BTD8 480 aaKnown RBP8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 SIL1Q9H173 461 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 E9PCH4 1651 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 GCP02774 474 aa8.77□□□□□ -1.01
TGFBR3-202ENST00000370399 G3BP1Q13283 466 aaKnown RBP eCLIP8.77□□□□□ -1.017e-7■□□□□ 9.5
TGFBR3-202ENST00000370399 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 MAP4K4O95819 1239 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 CCT4P50991 539 aaKnown RBP8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 PIP4K2BP78356 416 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 IL16Q14005 1332 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 BLMP54132 1417 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 SRGAP3O43295 1099 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 RNF17Q9BXT8 1623 aaKnown RBP8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 TRPM1Q7Z4N2 1603 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 FLIIQ13045 1269 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 MEIS3Q99687 375 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 CFAP74Q9C0B2 1584 aa8.76□□□□□ -1.01
TGFBR3-202ENST00000370399 HOXC9P31274 260 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 SLC39A6Q13433 755 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 SPG7Q9UQ90 795 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 KAT6BQ8WYB5 2073 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 DIAPH3Q9NSV4 1193 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 EDC4Q6P2E9 1401 aaKnown RBP8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 ST18O60284 1047 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 CDC45O75419 566 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 C19orf44Q9H6X5 657 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 KIF1BO60333 1816 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 REC8O95072 547 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 PIP4K2AP48426 406 aaPredicted RBP8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 TSHZ3Q63HK5 1081 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms