RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 C3P01024 1663 aa11.65□□□□□ -0.54
SFR1-201ENST00000369727 PREX1Q8TCU6 1659 aa11.65□□□□□ -0.54
SFR1-201ENST00000369727 CEBPAP49715 358 aaPredicted RBP11.65□□□□□ -0.54
SFR1-201ENST00000369727 MORN1Q5T089 497 aa11.65□□□□□ -0.54
SFR1-201ENST00000369727 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
SFR1-201ENST00000369727 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
SFR1-201ENST00000369727 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
SFR1-201ENST00000369727 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
SFR1-201ENST00000369727 DHX29Q7Z478 1369 aaKnown RBP11.64□□□□□ -0.55
SFR1-201ENST00000369727 GFRA3O60609 400 aa11.63□□□□□ -0.55
SFR1-201ENST00000369727 SPSB2Q99619 263 aa11.63□□□□□ -0.55
SFR1-201ENST00000369727 SLC6A16Q9GZN6 736 aa11.63□□□□□ -0.55
SFR1-201ENST00000369727 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
SFR1-201ENST00000369727 CD46P15529 392 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 Q6ZNB5 142 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 SLC27A5Q9Y2P5 690 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 UHRF1BP1Q6BDS2 1440 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 ZMYM3Q14202 1370 aa11.61□□□□□ -0.55
SFR1-201ENST00000369727 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
SFR1-201ENST00000369727 HSPA2P54652 639 aa11.6□□□□□ -0.55
SFR1-201ENST00000369727 GGT6Q6P531 493 aa11.6□□□□□ -0.55
SFR1-201ENST00000369727 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
SFR1-201ENST00000369727 NPATQ14207 1427 aa11.6□□□□□ -0.55
SFR1-201ENST00000369727 SLC19A1P41440 591 aa11.6□□□□□ -0.55
SFR1-201ENST00000369727 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
SFR1-201ENST00000369727 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
SFR1-201ENST00000369727 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
SFR1-201ENST00000369727 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
SFR1-201ENST00000369727 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
SFR1-201ENST00000369727 KIF3BO15066 747 aa11.58□□□□□ -0.56
SFR1-201ENST00000369727 FGD6Q6ZV73 1430 aa11.58□□□□□ -0.56
SFR1-201ENST00000369727 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
SFR1-201ENST00000369727 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
SFR1-201ENST00000369727 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
SFR1-201ENST00000369727 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
SFR1-201ENST00000369727 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
SFR1-201ENST00000369727 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
SFR1-201ENST00000369727 ZC3H15Q8WU90 426 aaKnown RBP11.56□□□□□ -0.56
SFR1-201ENST00000369727 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
SFR1-201ENST00000369727 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
SFR1-201ENST00000369727 ABCC5O15440 1437 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 ZMYND10O75800 440 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 CLCN1P35523 988 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
SFR1-201ENST00000369727 DNMT1P26358 1616 aaKnown RBP11.55□□□□□ -0.56
SFR1-201ENST00000369727 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
SFR1-201ENST00000369727 KDM4AO75164 1064 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
SFR1-201ENST00000369727 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
SFR1-201ENST00000369727 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 DAPK1P53355 1430 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 DUOX2Q9NRD8 1548 aa11.54□□□□□ -0.56
SFR1-201ENST00000369727 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
SFR1-201ENST00000369727 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
SFR1-201ENST00000369727 RNF19BQ6ZMZ0 732 aa11.53□□□□□ -0.56
SFR1-201ENST00000369727 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
SFR1-201ENST00000369727 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
SFR1-201ENST00000369727 WASHC2CQ9Y4E1 1318 aa11.53□□□□□ -0.56
SFR1-201ENST00000369727 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.57
SFR1-201ENST00000369727 PZPP20742 1482 aa11.52□□□□□ -0.57
SFR1-201ENST00000369727 PRDM9Q9NQV7 894 aa11.52□□□□□ -0.57
SFR1-201ENST00000369727 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
SFR1-201ENST00000369727 ZC3H13Q5T200 1668 aaKnown RBP11.51□□□□□ -0.57
SFR1-201ENST00000369727 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
SFR1-201ENST00000369727 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
SFR1-201ENST00000369727 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
SFR1-201ENST00000369727 ERBINQ96RT1 1412 aa11.5□□□□□ -0.57
SFR1-201ENST00000369727 TRIM67Q6ZTA4 783 aa11.5□□□□□ -0.57
SFR1-201ENST00000369727 HLA-CQ95604 372 aa11.5□□□□□ -0.57
SFR1-201ENST00000369727 PTPRTO14522 1441 aa11.5□□□□□ -0.57
SFR1-201ENST00000369727 NCOA1Q15788 1441 aa11.5□□□□□ -0.57
SFR1-201ENST00000369727 CEP170BQ9Y4F5 1589 aaPredicted RBP11.49□□□□□ -0.57
SFR1-201ENST00000369727 MROH1Q8NDA8 1641 aa11.49□□□□□ -0.57
SFR1-201ENST00000369727 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
SFR1-201ENST00000369727 ABCC3O15438 1527 aa11.49□□□□□ -0.57
SFR1-201ENST00000369727 TNRQ92752 1358 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 LCE2BO14633 110 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 USP46P62068 366 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 Q3C1V9 767 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 ZNF697Q5TEC3 545 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 FCF1Q9Y324 198 aaKnown RBP11.48□□□□□ -0.57
SFR1-201ENST00000369727 CAMSAP1Q5T5Y3 1602 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 PLA2R1Q13018 1463 aa11.48□□□□□ -0.57
SFR1-201ENST00000369727 HOXA2O43364 376 aa11.47□□□□□ -0.57
SFR1-201ENST00000369727 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
SFR1-201ENST00000369727 MSS51Q4VC12 460 aa11.47□□□□□ -0.57
SFR1-201ENST00000369727 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
SFR1-201ENST00000369727 ADGRL2O95490 1459 aa11.47□□□□□ -0.57
SFR1-201ENST00000369727 PRDM15P57071 1507 aaPredicted RBP11.47□□□□□ -0.57
SFR1-201ENST00000369727 TRAF7Q6Q0C0 670 aa11.46□□□□□ -0.57
SFR1-201ENST00000369727 DEPDC5O75140 1603 aa11.46□□□□□ -0.58
SFR1-201ENST00000369727 NLRP1Q9C000 1473 aa11.45□□□□□ -0.58
SFR1-201ENST00000369727 CEP152O94986 1710 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms