RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
CHD1L-202ENST00000369258 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
CHD1L-202ENST00000369258 ABCC11Q96J66 1382 aa16.04■□□□□ 0.16
CHD1L-202ENST00000369258 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-202ENST00000369258 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-202ENST00000369258 IL16Q14005 1332 aa16.03■□□□□ 0.16
CHD1L-202ENST00000369258 DDIT3P35638 169 aa16.03■□□□□ 0.16
CHD1L-202ENST00000369258 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
CHD1L-202ENST00000369258 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
CHD1L-202ENST00000369258 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-202ENST00000369258 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHD1L-202ENST00000369258 MCM10Q7L590 875 aa16.03■□□□□ 0.16
CHD1L-202ENST00000369258 RPGRIP1LQ68CZ1 1315 aa16.03■□□□□ 0.16
CHD1L-202ENST00000369258 ESPNB1AK53 854 aa16.02■□□□□ 0.16
CHD1L-202ENST00000369258 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
CHD1L-202ENST00000369258 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
CHD1L-202ENST00000369258 USP32Q8NFA0 1604 aa16.02■□□□□ 0.16
CHD1L-202ENST00000369258 HDGFL2Q7Z4V5 671 aaPredicted RBP16.02■□□□□ 0.15
CHD1L-202ENST00000369258 DDX49Q9Y6V7 483 aaKnown RBP16.02■□□□□ 0.15
CHD1L-202ENST00000369258 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
CHD1L-202ENST00000369258 NCOA3Q9Y6Q9 1424 aa16.01■□□□□ 0.15
CHD1L-202ENST00000369258 SKOR2Q2VWA4 1001 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-202ENST00000369258 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
CHD1L-202ENST00000369258 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
CHD1L-202ENST00000369258 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 PPLO60437 1756 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 F6X3S4 739 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
CHD1L-202ENST00000369258 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
CHD1L-202ENST00000369258 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
CHD1L-202ENST00000369258 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-202ENST00000369258 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
CHD1L-202ENST00000369258 ALDH1L2Q3SY69 923 aa15.99■□□□□ 0.15
CHD1L-202ENST00000369258 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
CHD1L-202ENST00000369258 PTMSP20962 102 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 FCHSD2O94868 740 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
CHD1L-202ENST00000369258 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
CHD1L-202ENST00000369258 FOXO3O43524 673 aa15.97■□□□□ 0.15
CHD1L-202ENST00000369258 MEIS3Q99687 375 aa15.97■□□□□ 0.15
CHD1L-202ENST00000369258 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
CHD1L-202ENST00000369258 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
CHD1L-202ENST00000369258 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
CHD1L-202ENST00000369258 HSP90AA2PQ14568 343 aaPredicted RBP15.96■□□□□ 0.15
CHD1L-202ENST00000369258 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
CHD1L-202ENST00000369258 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
CHD1L-202ENST00000369258 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
CHD1L-202ENST00000369258 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.14
CHD1L-202ENST00000369258 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
CHD1L-202ENST00000369258 PRPF40AO75400 957 aaKnown RBP15.95■□□□□ 0.14
CHD1L-202ENST00000369258 LARP6Q9BRS8 491 aaKnown RBP15.95■□□□□ 0.14
CHD1L-202ENST00000369258 MYO5BQ9ULV0 1848 aa15.94■□□□□ 0.14
CHD1L-202ENST00000369258 SULT6B1Q6IMI4 303 aa15.94■□□□□ 0.14
CHD1L-202ENST00000369258 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
CHD1L-202ENST00000369258 RNF214Q8ND24 703 aa15.94■□□□□ 0.14
CHD1L-202ENST00000369258 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
CHD1L-202ENST00000369258 NASPP49321 788 aaPredicted RBP15.94■□□□□ 0.14
CHD1L-202ENST00000369258 RBM10P98175 930 aaKnown RBP15.94■□□□□ 0.14
CHD1L-202ENST00000369258 SDSP20132 328 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 ABCC3O15438 1527 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 CDC45O75419 566 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 IL13P35225 146 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 G2E3Q7L622 706 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 NEXMIFQ5QGS0 1516 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 EXOC6BQ9Y2D4 811 aa15.93■□□□□ 0.14
CHD1L-202ENST00000369258 ANP32BQ92688 251 aaKnown RBP15.92■□□□□ 0.14
CHD1L-202ENST00000369258 POGZQ7Z3K3 1410 aa15.91■□□□□ 0.14
CHD1L-202ENST00000369258 RRP9O43818 475 aaKnown RBP15.91■□□□□ 0.14
CHD1L-202ENST00000369258 GNAI1P63096 354 aa15.91■□□□□ 0.14
CHD1L-202ENST00000369258 PTPRMP28827 1452 aa15.91■□□□□ 0.14
CHD1L-202ENST00000369258 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
CHD1L-202ENST00000369258 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
CHD1L-202ENST00000369258 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
CHD1L-202ENST00000369258 MAP4K4O95819 1239 aaPredicted RBP15.9■□□□□ 0.14
CHD1L-202ENST00000369258 USP26Q9BXU7 913 aa15.9■□□□□ 0.14
CHD1L-202ENST00000369258 RBSNQ9H1K0 784 aa15.9■□□□□ 0.14
CHD1L-202ENST00000369258 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 TTC22Q5TAA0 569 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 ABCC4O15439 1325 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 CCDC173Q0VFZ6 552 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 ARHGAP45Q92619 1136 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
CHD1L-202ENST00000369258 MSH6P52701 1360 aa15.88■□□□□ 0.13
CHD1L-202ENST00000369258 PNPLA6Q8IY17 1366 aa15.88■□□□□ 0.13
CHD1L-202ENST00000369258 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
CHD1L-202ENST00000369258 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
CHD1L-202ENST00000369258 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
CHD1L-202ENST00000369258 ZDHHC9Q9Y397 364 aa15.88■□□□□ 0.13
CHD1L-202ENST00000369258 GPT2Q8TD30 523 aa15.88■□□□□ 0.13
CHD1L-202ENST00000369258 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
CHD1L-202ENST00000369258 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms