RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 KIF2CQ99661 725 aa23.23■■□□□ 1.31
PRDM13-201ENST00000369214 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
PRDM13-201ENST00000369214 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
PRDM13-201ENST00000369214 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
PRDM13-201ENST00000369214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRDM13-201ENST00000369214 C1orf115Q9H7X2 142 aa23.21■■□□□ 1.31
PRDM13-201ENST00000369214 FBLN1P23142 703 aa23.21■■□□□ 1.31
PRDM13-201ENST00000369214 GNAI1P63096 354 aa23.21■■□□□ 1.31
PRDM13-201ENST00000369214 ISY1Q9ULR0 285 aaKnown RBP23.21■■□□□ 1.31
PRDM13-201ENST00000369214 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
PRDM13-201ENST00000369214 THUMPD2Q9BTF0 503 aaKnown RBP23.21■■□□□ 1.31
PRDM13-201ENST00000369214 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
PRDM13-201ENST00000369214 ATP7BP35670 1465 aa23.2■■□□□ 1.31
PRDM13-201ENST00000369214 HMOX1P09601 288 aa23.2■■□□□ 1.3
PRDM13-201ENST00000369214 ABCC4O15439 1325 aa23.2■■□□□ 1.3
PRDM13-201ENST00000369214 RAB3GAP1Q15042 981 aa23.2■■□□□ 1.3
PRDM13-201ENST00000369214 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
PRDM13-201ENST00000369214 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
PRDM13-201ENST00000369214 GBP4Q96PP9 640 aa23.19■■□□□ 1.3
PRDM13-201ENST00000369214 GRPEL1Q9HAV7 217 aa23.19■■□□□ 1.3
PRDM13-201ENST00000369214 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
PRDM13-201ENST00000369214 ZNF853P0CG23 659 aa23.18■■□□□ 1.3
PRDM13-201ENST00000369214 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
PRDM13-201ENST00000369214 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
PRDM13-201ENST00000369214 DLC1Q96QB1 1528 aa23.15■■□□□ 1.3
PRDM13-201ENST00000369214 K7ELQ4 463 aaPredicted RBP23.15■■□□□ 1.3
PRDM13-201ENST00000369214 CD2BP2O95400 341 aaKnown RBP23.15■■□□□ 1.3
PRDM13-201ENST00000369214 ELL2O00472 640 aaPredicted RBP23.15■■□□□ 1.3
PRDM13-201ENST00000369214 PTMSP20962 102 aa23.15■■□□□ 1.3
PRDM13-201ENST00000369214 IL13P35225 146 aa23.15■■□□□ 1.3
PRDM13-201ENST00000369214 CLCN1P35523 988 aa23.14■■□□□ 1.3
PRDM13-201ENST00000369214 SKOR2Q2VWA4 1001 aaPredicted RBP23.14■■□□□ 1.3
PRDM13-201ENST00000369214 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.3
PRDM13-201ENST00000369214 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
PRDM13-201ENST00000369214 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
PRDM13-201ENST00000369214 EMILIN1Q9Y6C2 1016 aa23.14■■□□□ 1.29
PRDM13-201ENST00000369214 DLG5Q8TDM6 1919 aa23.13■■□□□ 1.29
PRDM13-201ENST00000369214 API5Q9BZZ5 524 aaKnown RBP23.13■■□□□ 1.29
PRDM13-201ENST00000369214 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
PRDM13-201ENST00000369214 CDC45O75419 566 aa23.12■■□□□ 1.29
PRDM13-201ENST00000369214 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
PRDM13-201ENST00000369214 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
PRDM13-201ENST00000369214 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
PRDM13-201ENST00000369214 RBM42Q9BTD8 480 aaKnown RBP23.11■■□□□ 1.29
PRDM13-201ENST00000369214 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
PRDM13-201ENST00000369214 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
PRDM13-201ENST00000369214 FOXD4L1Q9NU39 408 aa23.1■■□□□ 1.29
PRDM13-201ENST00000369214 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
PRDM13-201ENST00000369214 KIF24Q5T7B8 1368 aa23.1■■□□□ 1.29
PRDM13-201ENST00000369214 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
PRDM13-201ENST00000369214 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
PRDM13-201ENST00000369214 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.29
PRDM13-201ENST00000369214 GAS2L3Q86XJ1 694 aa23.08■■□□□ 1.28
PRDM13-201ENST00000369214 RIMS2Q9UQ26 1411 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 GSPT1P15170 499 aaKnown RBP23.07■■□□□ 1.28
PRDM13-201ENST00000369214 NME9Q86XW9 330 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
PRDM13-201ENST00000369214 PLEKHM2Q8IWE5 1019 aa23.06■■□□□ 1.28
PRDM13-201ENST00000369214 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
PRDM13-201ENST00000369214 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
PRDM13-201ENST00000369214 CLEC17AQ6ZS10 378 aa23.05■■□□□ 1.28
PRDM13-201ENST00000369214 SSFA2P28290 1259 aa23.04■■□□□ 1.28
PRDM13-201ENST00000369214 ZRANB1Q9UGI0 708 aa23.04■■□□□ 1.28
PRDM13-201ENST00000369214 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
PRDM13-201ENST00000369214 TTC22Q5TAA0 569 aa23.03■■□□□ 1.28
PRDM13-201ENST00000369214 GOLGA6L22H0YM25 854 aa23.02■■□□□ 1.28
PRDM13-201ENST00000369214 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
PRDM13-201ENST00000369214 RABEP1Q15276 862 aa23.02■■□□□ 1.28
PRDM13-201ENST00000369214 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
PRDM13-201ENST00000369214 ESPNB1AK53 854 aa23.02■■□□□ 1.28
PRDM13-201ENST00000369214 INTS3Q68E01 1043 aaKnown RBP23.02■■□□□ 1.28
PRDM13-201ENST00000369214 COG3Q96JB2 828 aa23.01■■□□□ 1.27
PRDM13-201ENST00000369214 NAP1L5Q96NT1 182 aaPredicted RBP23.01■■□□□ 1.27
PRDM13-201ENST00000369214 DCTN1Q14203 1278 aa23■■□□□ 1.27
PRDM13-201ENST00000369214 UBE2Q2Q8WVN8 375 aa23■■□□□ 1.27
PRDM13-201ENST00000369214 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
PRDM13-201ENST00000369214 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
PRDM13-201ENST00000369214 ANKRD44Q8N8A2 993 aa22.99■■□□□ 1.27
PRDM13-201ENST00000369214 BAG4O95429 457 aaKnown RBP22.99■■□□□ 1.27
PRDM13-201ENST00000369214 TRIM44Q96DX7 344 aaPredicted RBP22.99■■□□□ 1.27
PRDM13-201ENST00000369214 CPS1P31327 1500 aa22.99■■□□□ 1.27
PRDM13-201ENST00000369214 ATP10DQ9P241 1426 aa22.98■■□□□ 1.27
PRDM13-201ENST00000369214 ERBB4Q15303 1308 aa22.98■■□□□ 1.27
PRDM13-201ENST00000369214 C16orf71Q8IYS4 520 aaPredicted RBP22.98■■□□□ 1.27
PRDM13-201ENST00000369214 USP26Q9BXU7 913 aa22.98■■□□□ 1.27
PRDM13-201ENST00000369214 KLHL40Q2TBA0 621 aa22.97■■□□□ 1.27
PRDM13-201ENST00000369214 RPAP2Q8IXW5 612 aaPredicted RBP22.97■■□□□ 1.27
PRDM13-201ENST00000369214 AK9Q5TCS8 1911 aa22.96■■□□□ 1.27
PRDM13-201ENST00000369214 NUDT16Q96DE0 195 aaKnown RBP22.96■■□□□ 1.27
PRDM13-201ENST00000369214 RGS12O14924 1447 aa22.96■■□□□ 1.27
PRDM13-201ENST00000369214 IBTKQ9P2D0 1353 aaPredicted RBP22.96■■□□□ 1.27
PRDM13-201ENST00000369214 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
PRDM13-201ENST00000369214 DDX49Q9Y6V7 483 aaKnown RBP22.95■■□□□ 1.26
PRDM13-201ENST00000369214 C3P01024 1663 aa22.94■■□□□ 1.26
PRDM13-201ENST00000369214 NUCB2P80303 420 aa22.94■■□□□ 1.26
PRDM13-201ENST00000369214 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
PRDM13-201ENST00000369214 CEP85Q6P2H3 762 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms