RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 RIPK4P57078 832 aa16.92■□□□□ 0.3
ECM1-202ENST00000369047 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
ECM1-202ENST00000369047 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
ECM1-202ENST00000369047 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
ECM1-202ENST00000369047 AKAP12Q02952 1782 aa16.9■□□□□ 0.3
ECM1-202ENST00000369047 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
ECM1-202ENST00000369047 COG3Q96JB2 828 aa16.9■□□□□ 0.3
ECM1-202ENST00000369047 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
ECM1-202ENST00000369047 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
ECM1-202ENST00000369047 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
ECM1-202ENST00000369047 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
ECM1-202ENST00000369047 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
ECM1-202ENST00000369047 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
ECM1-202ENST00000369047 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
ECM1-202ENST00000369047 NHSL1Q5SYE7 1610 aa16.87■□□□□ 0.29
ECM1-202ENST00000369047 CALD1Q05682 793 aaKnown RBP16.87■□□□□ 0.29
ECM1-202ENST00000369047 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
ECM1-202ENST00000369047 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
ECM1-202ENST00000369047 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
ECM1-202ENST00000369047 IGHDP01880 384 aa16.86■□□□□ 0.29
ECM1-202ENST00000369047 NME9Q86XW9 330 aa16.86■□□□□ 0.29
ECM1-202ENST00000369047 ZNF428Q96B54 188 aa16.86■□□□□ 0.29
ECM1-202ENST00000369047 PHF8Q9UPP1 1060 aa16.86■□□□□ 0.29
ECM1-202ENST00000369047 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
ECM1-202ENST00000369047 PLEKHG3A1L390 1219 aa16.85■□□□□ 0.29
ECM1-202ENST00000369047 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
ECM1-202ENST00000369047 IL13P35225 146 aa16.85■□□□□ 0.29
ECM1-202ENST00000369047 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
ECM1-202ENST00000369047 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
ECM1-202ENST00000369047 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
ECM1-202ENST00000369047 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
ECM1-202ENST00000369047 NFE2L2Q16236 605 aa16.84■□□□□ 0.29
ECM1-202ENST00000369047 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
ECM1-202ENST00000369047 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
ECM1-202ENST00000369047 MVPQ14764 893 aaKnown RBP16.84■□□□□ 0.29
ECM1-202ENST00000369047 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
ECM1-202ENST00000369047 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.29
ECM1-202ENST00000369047 RLBP1P12271 317 aa16.83■□□□□ 0.28
ECM1-202ENST00000369047 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
ECM1-202ENST00000369047 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
ECM1-202ENST00000369047 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
ECM1-202ENST00000369047 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
ECM1-202ENST00000369047 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
ECM1-202ENST00000369047 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
ECM1-202ENST00000369047 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
ECM1-202ENST00000369047 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
ECM1-202ENST00000369047 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
ECM1-202ENST00000369047 PSME1Q06323 249 aa16.82■□□□□ 0.28
ECM1-202ENST00000369047 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
ECM1-202ENST00000369047 FBLN1P23142 703 aa16.81■□□□□ 0.28
ECM1-202ENST00000369047 LMOD3Q0VAK6 560 aa16.81■□□□□ 0.28
ECM1-202ENST00000369047 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
ECM1-202ENST00000369047 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
ECM1-202ENST00000369047 SSH1Q8WYL5 1049 aa16.81■□□□□ 0.28
ECM1-202ENST00000369047 KIF16BQ96L93 1317 aa16.8■□□□□ 0.28
ECM1-202ENST00000369047 RGS3P49796 1198 aa16.8■□□□□ 0.28
ECM1-202ENST00000369047 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
ECM1-202ENST00000369047 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
ECM1-202ENST00000369047 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
ECM1-202ENST00000369047 TTC21BQ7Z4L5 1316 aa16.8■□□□□ 0.28
ECM1-202ENST00000369047 COL16A1Q07092 1604 aaPredicted RBP16.8■□□□□ 0.28
ECM1-202ENST00000369047 HSPA1LP34931 641 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 DDX19BQ9UMR2 479 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 ACEP12821 1306 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 GNAI1P63096 354 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 PCDHB15Q9Y5E8 787 aa16.79■□□□□ 0.28
ECM1-202ENST00000369047 HMOX1P09601 288 aa16.78■□□□□ 0.28
ECM1-202ENST00000369047 LRRC59Q96AG4 307 aaKnown RBP16.78■□□□□ 0.28
ECM1-202ENST00000369047 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
ECM1-202ENST00000369047 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
ECM1-202ENST00000369047 SOS2Q07890 1332 aaPredicted RBP16.78■□□□□ 0.28
ECM1-202ENST00000369047 TNNQ9UQP3 1299 aa16.77■□□□□ 0.28
ECM1-202ENST00000369047 FOXO3O43524 673 aa16.77■□□□□ 0.27
ECM1-202ENST00000369047 TRIM27P14373 513 aa16.77■□□□□ 0.27
ECM1-202ENST00000369047 USP6P35125 1406 aa16.77■□□□□ 0.27
ECM1-202ENST00000369047 PXDNQ92626 1479 aa16.77■□□□□ 0.27
ECM1-202ENST00000369047 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
ECM1-202ENST00000369047 JCADQ9P266 1359 aa16.76■□□□□ 0.27
ECM1-202ENST00000369047 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
ECM1-202ENST00000369047 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
ECM1-202ENST00000369047 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
ECM1-202ENST00000369047 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
ECM1-202ENST00000369047 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
ECM1-202ENST00000369047 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
ECM1-202ENST00000369047 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
ECM1-202ENST00000369047 USP31Q70CQ4 1352 aa16.75■□□□□ 0.27
ECM1-202ENST00000369047 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
ECM1-202ENST00000369047 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
ECM1-202ENST00000369047 VIRMAQ69YN4 1812 aaKnown RBP16.74■□□□□ 0.27
ECM1-202ENST00000369047 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
ECM1-202ENST00000369047 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
ECM1-202ENST00000369047 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
ECM1-202ENST00000369047 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
ECM1-202ENST00000369047 TNS3Q68CZ2 1445 aa16.72■□□□□ 0.27
ECM1-202ENST00000369047 TRPM3Q9HCF6 1732 aaPredicted RBP16.72■□□□□ 0.27
ECM1-202ENST00000369047 VAMP4O75379 141 aa16.71■□□□□ 0.27
ECM1-202ENST00000369047 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
ECM1-202ENST00000369047 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms