RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
LMNA-206ENST00000368300 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
LMNA-206ENST00000368300 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
LMNA-206ENST00000368300 C3P01024 1663 aa15.78■□□□□ 0.12
LMNA-206ENST00000368300 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
LMNA-206ENST00000368300 SULT6B1Q6IMI4 303 aa15.77■□□□□ 0.12
LMNA-206ENST00000368300 IL16Q14005 1332 aa15.77■□□□□ 0.12
LMNA-206ENST00000368300 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.12
LMNA-206ENST00000368300 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
LMNA-206ENST00000368300 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
LMNA-206ENST00000368300 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.11
LMNA-206ENST00000368300 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
LMNA-206ENST00000368300 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
LMNA-206ENST00000368300 KNDC1Q76NI1 1749 aa15.76■□□□□ 0.11
LMNA-206ENST00000368300 C8orf34Q49A92 452 aa15.74■□□□□ 0.11
LMNA-206ENST00000368300 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
LMNA-206ENST00000368300 USP6P35125 1406 aa15.74■□□□□ 0.11
LMNA-206ENST00000368300 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
LMNA-206ENST00000368300 CDK12Q9NYV4 1490 aaPredicted RBP15.74■□□□□ 0.11
LMNA-206ENST00000368300 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
LMNA-206ENST00000368300 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
LMNA-206ENST00000368300 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
LMNA-206ENST00000368300 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
LMNA-206ENST00000368300 SLIT1O75093 1534 aa15.72■□□□□ 0.11
LMNA-206ENST00000368300 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
LMNA-206ENST00000368300 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
LMNA-206ENST00000368300 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.11
LMNA-206ENST00000368300 VAMP4O75379 141 aa15.71■□□□□ 0.1
LMNA-206ENST00000368300 MCM10Q7L590 875 aa15.71■□□□□ 0.1
LMNA-206ENST00000368300 C8orf58Q8NAV2 365 aa15.71■□□□□ 0.1
LMNA-206ENST00000368300 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.1
LMNA-206ENST00000368300 NLRP6P59044 892 aa15.7■□□□□ 0.1
LMNA-206ENST00000368300 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
LMNA-206ENST00000368300 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
LMNA-206ENST00000368300 OVOS2A0A0J9YW53 1432 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 OVOS2Q6IE36 1432 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 GNAI1P63096 354 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 SLC4A3P48751 1232 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 PKNOX2Q96KN3 472 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 RTL5Q5HYW3 569 aaPredicted RBP15.69■□□□□ 0.1
LMNA-206ENST00000368300 RWDD1Q9H446 243 aaPredicted RBP15.69■□□□□ 0.1
LMNA-206ENST00000368300 IFT57Q9NWB7 429 aa15.69■□□□□ 0.1
LMNA-206ENST00000368300 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
LMNA-206ENST00000368300 FOXO3O43524 673 aa15.68■□□□□ 0.1
LMNA-206ENST00000368300 AKAP12Q02952 1782 aa15.68■□□□□ 0.1
LMNA-206ENST00000368300 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
LMNA-206ENST00000368300 AMPHP49418 695 aa15.68■□□□□ 0.1
LMNA-206ENST00000368300 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
LMNA-206ENST00000368300 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
LMNA-206ENST00000368300 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
LMNA-206ENST00000368300 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
LMNA-206ENST00000368300 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
LMNA-206ENST00000368300 MIS18AQ9NYP9 233 aa15.67■□□□□ 0.1
LMNA-206ENST00000368300 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
LMNA-206ENST00000368300 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
LMNA-206ENST00000368300 KIF16BQ96L93 1317 aa15.66■□□□□ 0.1
LMNA-206ENST00000368300 SEC24BO95487 1268 aa15.66■□□□□ 0.1
LMNA-206ENST00000368300 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
LMNA-206ENST00000368300 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
LMNA-206ENST00000368300 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
LMNA-206ENST00000368300 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
LMNA-206ENST00000368300 LMOD3Q0VAK6 560 aa15.65■□□□□ 0.1
LMNA-206ENST00000368300 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
LMNA-206ENST00000368300 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
LMNA-206ENST00000368300 C1orf115Q9H7X2 142 aa15.65■□□□□ 0.1
LMNA-206ENST00000368300 USP31Q70CQ4 1352 aa15.64■□□□□ 0.09
LMNA-206ENST00000368300 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
LMNA-206ENST00000368300 AAMPQ13685 434 aa15.64■□□□□ 0.09
LMNA-206ENST00000368300 ZBTB40Q9NUA8 1239 aa15.64■□□□□ 0.09
LMNA-206ENST00000368300 EYA1Q99502 592 aa15.63■□□□□ 0.09
LMNA-206ENST00000368300 RGPD8O14715 1765 aaPredicted RBP15.63■□□□□ 0.09
LMNA-206ENST00000368300 TOPAZ1Q8N9V7 1692 aa15.62■□□□□ 0.09
LMNA-206ENST00000368300 ZBTB7CA1YPR0 619 aa15.62■□□□□ 0.09
LMNA-206ENST00000368300 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
LMNA-206ENST00000368300 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
LMNA-206ENST00000368300 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
LMNA-206ENST00000368300 PEAK1Q9H792 1746 aa15.61■□□□□ 0.09
LMNA-206ENST00000368300 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
LMNA-206ENST00000368300 ESCO1Q5FWF5 840 aa15.61■□□□□ 0.09
LMNA-206ENST00000368300 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
LMNA-206ENST00000368300 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
LMNA-206ENST00000368300 USHBP1Q8N6Y0 703 aa15.59■□□□□ 0.09
LMNA-206ENST00000368300 FLT4P35916 1363 aa15.59■□□□□ 0.09
LMNA-206ENST00000368300 ZNF428Q96B54 188 aa15.59■□□□□ 0.09
LMNA-206ENST00000368300 SBNO1A3KN83 1393 aa15.58■□□□□ 0.09
LMNA-206ENST00000368300 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
LMNA-206ENST00000368300 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
LMNA-206ENST00000368300 CHL1O00533 1208 aa15.58■□□□□ 0.08
LMNA-206ENST00000368300 HOXC9P31274 260 aa15.58■□□□□ 0.08
LMNA-206ENST00000368300 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
LMNA-206ENST00000368300 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
LMNA-206ENST00000368300 BRPF1P55201 1214 aaPredicted RBP15.57■□□□□ 0.08
LMNA-206ENST00000368300 PSME1Q06323 249 aa15.57■□□□□ 0.08
LMNA-206ENST00000368300 USP19O94966 1318 aa15.56■□□□□ 0.08
LMNA-206ENST00000368300 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
LMNA-206ENST00000368300 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
LMNA-206ENST00000368300 LNPKQ9C0E8 428 aa15.56■□□□□ 0.08
LMNA-206ENST00000368300 XRN1Q8IZH2 1706 aaKnown RBP15.56■□□□□ 0.08
LMNA-206ENST00000368300 LMOD2Q6P5Q4 547 aa15.56■□□□□ 0.08
LMNA-206ENST00000368300 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms