RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
SNHG28-201ENST00000368102 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
SNHG28-201ENST00000368102 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
SNHG28-201ENST00000368102 MAP2P11137 1827 aaKnown RBP17.85■□□□□ 0.45
SNHG28-201ENST00000368102 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
SNHG28-201ENST00000368102 THUMPD2Q9BTF0 503 aaKnown RBP17.84■□□□□ 0.45
SNHG28-201ENST00000368102 CDK12Q9NYV4 1490 aaPredicted RBP17.84■□□□□ 0.45
SNHG28-201ENST00000368102 PTPRUQ92729 1446 aa17.84■□□□□ 0.45
SNHG28-201ENST00000368102 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
SNHG28-201ENST00000368102 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
SNHG28-201ENST00000368102 NFE2L2Q16236 605 aa17.83■□□□□ 0.45
SNHG28-201ENST00000368102 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.45
SNHG28-201ENST00000368102 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.45
SNHG28-201ENST00000368102 ACEP12821 1306 aa17.83■□□□□ 0.45
SNHG28-201ENST00000368102 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.83■□□□□ 0.44
SNHG28-201ENST00000368102 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
SNHG28-201ENST00000368102 RIMS1Q86UR5 1692 aaKnown RBP17.82■□□□□ 0.44
SNHG28-201ENST00000368102 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
SNHG28-201ENST00000368102 TTC21BQ7Z4L5 1316 aa17.82■□□□□ 0.44
SNHG28-201ENST00000368102 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
SNHG28-201ENST00000368102 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
SNHG28-201ENST00000368102 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
SNHG28-201ENST00000368102 C3P01024 1663 aa17.81■□□□□ 0.44
SNHG28-201ENST00000368102 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
SNHG28-201ENST00000368102 AKAP12Q02952 1782 aa17.8■□□□□ 0.44
SNHG28-201ENST00000368102 ARHGAP23Q9P227 1491 aa17.8■□□□□ 0.44
SNHG28-201ENST00000368102 SLIT1O75093 1534 aa17.79■□□□□ 0.44
SNHG28-201ENST00000368102 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
SNHG28-201ENST00000368102 THEMISQ8N1K5 641 aaPredicted RBP17.79■□□□□ 0.44
SNHG28-201ENST00000368102 ITSN1Q15811 1721 aa17.79■□□□□ 0.44
SNHG28-201ENST00000368102 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
SNHG28-201ENST00000368102 BECN1Q14457 450 aa17.77■□□□□ 0.44
SNHG28-201ENST00000368102 USP6P35125 1406 aa17.77■□□□□ 0.44
SNHG28-201ENST00000368102 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
SNHG28-201ENST00000368102 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
SNHG28-201ENST00000368102 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
SNHG28-201ENST00000368102 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 OVOS2A0A0J9YW53 1432 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 OVOS2Q6IE36 1432 aa17.75■□□□□ 0.43
SNHG28-201ENST00000368102 GNAI1P63096 354 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 EIF4A2Q14240 407 aaKnown RBP17.74■□□□□ 0.43
SNHG28-201ENST00000368102 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 TBC1D2Q9BYX2 928 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 DDX19BQ9UMR2 479 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 TOPAZ1Q8N9V7 1692 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 IPO8O15397 1037 aaKnown RBP17.74■□□□□ 0.43
SNHG28-201ENST00000368102 IFT57Q9NWB7 429 aa17.74■□□□□ 0.43
SNHG28-201ENST00000368102 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
SNHG28-201ENST00000368102 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
SNHG28-201ENST00000368102 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
SNHG28-201ENST00000368102 VAMP4O75379 141 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
SNHG28-201ENST00000368102 SOX12O15370 315 aa17.71■□□□□ 0.43
SNHG28-201ENST00000368102 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
SNHG28-201ENST00000368102 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
SNHG28-201ENST00000368102 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
SNHG28-201ENST00000368102 ZBTB40Q9NUA8 1239 aa17.71■□□□□ 0.43
SNHG28-201ENST00000368102 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
SNHG28-201ENST00000368102 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
SNHG28-201ENST00000368102 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
SNHG28-201ENST00000368102 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
SNHG28-201ENST00000368102 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
SNHG28-201ENST00000368102 UPF2Q9HAU5 1272 aaKnown RBP17.7■□□□□ 0.42
SNHG28-201ENST00000368102 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
SNHG28-201ENST00000368102 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
SNHG28-201ENST00000368102 RBM33Q96EV2 1170 aaKnown RBP17.69■□□□□ 0.42
SNHG28-201ENST00000368102 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
SNHG28-201ENST00000368102 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
SNHG28-201ENST00000368102 KCNA6P17658 529 aa17.68■□□□□ 0.42
SNHG28-201ENST00000368102 HSPA2P54652 639 aa17.68■□□□□ 0.42
SNHG28-201ENST00000368102 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
SNHG28-201ENST00000368102 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
SNHG28-201ENST00000368102 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
SNHG28-201ENST00000368102 ARXQ96QS3 562 aa17.67■□□□□ 0.42
SNHG28-201ENST00000368102 ADAMTSL3P82987 1691 aa17.67■□□□□ 0.42
SNHG28-201ENST00000368102 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
SNHG28-201ENST00000368102 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
SNHG28-201ENST00000368102 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
SNHG28-201ENST00000368102 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
SNHG28-201ENST00000368102 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
SNHG28-201ENST00000368102 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
SNHG28-201ENST00000368102 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
SNHG28-201ENST00000368102 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
SNHG28-201ENST00000368102 NALCNQ8IZF0 1738 aa17.64■□□□□ 0.41
SNHG28-201ENST00000368102 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
SNHG28-201ENST00000368102 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
SNHG28-201ENST00000368102 MCM10Q7L590 875 aa17.62■□□□□ 0.41
SNHG28-201ENST00000368102 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
SNHG28-201ENST00000368102 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
SNHG28-201ENST00000368102 NUCB1Q02818 461 aa17.61■□□□□ 0.41
SNHG28-201ENST00000368102 SBNO1A3KN83 1393 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms