RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 THEMISQ8N1K5 641 aaPredicted RBP17.41■□□□□ 0.38
PARP1-203ENST00000366794 VAMP4O75379 141 aa17.4■□□□□ 0.38
PARP1-203ENST00000366794 MYL6BP14649 208 aa17.4■□□□□ 0.38
PARP1-203ENST00000366794 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
PARP1-203ENST00000366794 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
PARP1-203ENST00000366794 ABCC1P33527 1531 aa17.4■□□□□ 0.38
PARP1-203ENST00000366794 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
PARP1-203ENST00000366794 FOSBP53539 338 aa17.39■□□□□ 0.38
PARP1-203ENST00000366794 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
PARP1-203ENST00000366794 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
PARP1-203ENST00000366794 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
PARP1-203ENST00000366794 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
PARP1-203ENST00000366794 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
PARP1-203ENST00000366794 PRDM15P57071 1507 aaPredicted RBP17.39■□□□□ 0.37
PARP1-203ENST00000366794 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
PARP1-203ENST00000366794 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
PARP1-203ENST00000366794 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
PARP1-203ENST00000366794 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
PARP1-203ENST00000366794 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
PARP1-203ENST00000366794 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
PARP1-203ENST00000366794 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
PARP1-203ENST00000366794 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
PARP1-203ENST00000366794 REC8O95072 547 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 GNAI2P04899 355 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
PARP1-203ENST00000366794 MCM4P33991 863 aa17.36■□□□□ 0.37
PARP1-203ENST00000366794 RIMS2Q9UQ26 1411 aa17.36■□□□□ 0.37
PARP1-203ENST00000366794 AAMPQ13685 434 aa17.36■□□□□ 0.37
PARP1-203ENST00000366794 G2E3Q7L622 706 aa17.36■□□□□ 0.37
PARP1-203ENST00000366794 DIAPH3Q9NSV4 1193 aa17.36■□□□□ 0.37
PARP1-203ENST00000366794 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
PARP1-203ENST00000366794 POGZQ7Z3K3 1410 aa17.35■□□□□ 0.37
PARP1-203ENST00000366794 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
PARP1-203ENST00000366794 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
PARP1-203ENST00000366794 SRGAP3O43295 1099 aa17.35■□□□□ 0.37
PARP1-203ENST00000366794 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
PARP1-203ENST00000366794 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
PARP1-203ENST00000366794 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
PARP1-203ENST00000366794 IFIT2P09913 472 aaKnown RBP17.34■□□□□ 0.37
PARP1-203ENST00000366794 LTKP29376 864 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 CAVIN1Q6NZI2 390 aaKnown RBP17.34■□□□□ 0.37
PARP1-203ENST00000366794 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
PARP1-203ENST00000366794 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
PARP1-203ENST00000366794 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
PARP1-203ENST00000366794 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
PARP1-203ENST00000366794 PRPF40AO75400 957 aaKnown RBP17.33■□□□□ 0.37
PARP1-203ENST00000366794 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
PARP1-203ENST00000366794 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
PARP1-203ENST00000366794 GNAT3A8MTJ3 354 aa17.32■□□□□ 0.36
PARP1-203ENST00000366794 SSFA2P28290 1259 aa17.32■□□□□ 0.36
PARP1-203ENST00000366794 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
PARP1-203ENST00000366794 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
PARP1-203ENST00000366794 KCNA6P17658 529 aa17.31■□□□□ 0.36
PARP1-203ENST00000366794 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
PARP1-203ENST00000366794 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
PARP1-203ENST00000366794 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
PARP1-203ENST00000366794 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
PARP1-203ENST00000366794 GNAI3P08754 354 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
PARP1-203ENST00000366794 KDM4AO75164 1064 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 ZFYVE16Q7Z3T8 1539 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 ADCY10Q96PN6 1610 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
PARP1-203ENST00000366794 IL13P35225 146 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 NSD2O96028 1365 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 TNRQ92752 1358 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 NUCB1Q02818 461 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 FLIIQ13045 1269 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 NEUROD6Q96NK8 337 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
PARP1-203ENST00000366794 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 CWC27Q6UX04 472 aaKnown RBP17.29■□□□□ 0.36
PARP1-203ENST00000366794 EYA1Q99502 592 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
PARP1-203ENST00000366794 TRPM1Q7Z4N2 1603 aa17.28■□□□□ 0.36
PARP1-203ENST00000366794 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.364e-7■■■■□ 19.6
PARP1-203ENST00000366794 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
PARP1-203ENST00000366794 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
PARP1-203ENST00000366794 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
PARP1-203ENST00000366794 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
PARP1-203ENST00000366794 METP08581 1390 aa17.27■□□□□ 0.36
PARP1-203ENST00000366794 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
PARP1-203ENST00000366794 HDAC1Q13547 482 aaPredicted RBP17.27■□□□□ 0.36
PARP1-203ENST00000366794 ATF3P18847 181 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms