RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.18
LDB3-202ENST00000361373 RABEP1Q15276 862 aa16.2■□□□□ 0.18
LDB3-202ENST00000361373 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
LDB3-202ENST00000361373 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 DNAJC2Q99543 621 aaKnown RBP16.19■□□□□ 0.18
LDB3-202ENST00000361373 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
LDB3-202ENST00000361373 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 TNRQ92752 1358 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
LDB3-202ENST00000361373 NACAP1Q9BZK3 213 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
LDB3-202ENST00000361373 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
LDB3-202ENST00000361373 FOXD4L3Q6VB84 417 aaPredicted RBP16.18■□□□□ 0.18
LDB3-202ENST00000361373 ATP10BO94823 1461 aa16.18■□□□□ 0.18
LDB3-202ENST00000361373 BCAR3O75815 825 aa16.18■□□□□ 0.18
LDB3-202ENST00000361373 RAPGEF6Q8TEU7 1601 aa16.18■□□□□ 0.18
LDB3-202ENST00000361373 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
LDB3-202ENST00000361373 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
LDB3-202ENST00000361373 NOS1P29475 1434 aa16.17■□□□□ 0.18
LDB3-202ENST00000361373 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
LDB3-202ENST00000361373 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
LDB3-202ENST00000361373 CEP126Q9P2H0 1117 aa16.17■□□□□ 0.18
LDB3-202ENST00000361373 XPCQ01831 940 aaPredicted RBP16.17■□□□□ 0.18
LDB3-202ENST00000361373 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
LDB3-202ENST00000361373 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
LDB3-202ENST00000361373 TAF7Q15545 349 aaPredicted RBP16.16■□□□□ 0.18
LDB3-202ENST00000361373 DUOX2Q9NRD8 1548 aa16.16■□□□□ 0.18
LDB3-202ENST00000361373 FYB1O15117 783 aa16.16■□□□□ 0.18
LDB3-202ENST00000361373 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
LDB3-202ENST00000361373 MYL6BP14649 208 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 PIP4K2BP78356 416 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 ZNF518AQ6AHZ1 1483 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 SASS6Q6UVJ0 657 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 GSE1Q14687 1217 aa16.15■□□□□ 0.18
LDB3-202ENST00000361373 SRGAP3O43295 1099 aa16.14■□□□□ 0.17
LDB3-202ENST00000361373 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
LDB3-202ENST00000361373 NME9Q86XW9 330 aa16.14■□□□□ 0.17
LDB3-202ENST00000361373 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
LDB3-202ENST00000361373 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
LDB3-202ENST00000361373 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
LDB3-202ENST00000361373 FOXO3O43524 673 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 GOLGA6L1Q8N7Z2 621 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 A2MP01023 1474 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 NEK4P51957 841 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 WDR7Q9Y4E6 1490 aa16.13■□□□□ 0.17
LDB3-202ENST00000361373 CTNNA3Q9UI47 895 aa16.12■□□□□ 0.17
LDB3-202ENST00000361373 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
LDB3-202ENST00000361373 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
LDB3-202ENST00000361373 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
LDB3-202ENST00000361373 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
LDB3-202ENST00000361373 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
LDB3-202ENST00000361373 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
LDB3-202ENST00000361373 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
LDB3-202ENST00000361373 CCDC70Q6NSX1 233 aa16.11■□□□□ 0.17
LDB3-202ENST00000361373 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
LDB3-202ENST00000361373 MBD3O95983 291 aa16.1■□□□□ 0.17
LDB3-202ENST00000361373 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
LDB3-202ENST00000361373 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
LDB3-202ENST00000361373 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
LDB3-202ENST00000361373 ITSN2Q9NZM3 1697 aa16.1■□□□□ 0.17
LDB3-202ENST00000361373 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
LDB3-202ENST00000361373 NUP160Q12769 1436 aa16.1■□□□□ 0.17
LDB3-202ENST00000361373 ANKRD36BQ8N2N9 1353 aa16.1■□□□□ 0.17
LDB3-202ENST00000361373 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
LDB3-202ENST00000361373 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
LDB3-202ENST00000361373 KRT32Q14532 448 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 AACSQ86V21 672 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 SIL1Q9H173 461 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
LDB3-202ENST00000361373 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
LDB3-202ENST00000361373 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
LDB3-202ENST00000361373 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.17
LDB3-202ENST00000361373 JMYQ8N9B5 988 aa16.08■□□□□ 0.16
LDB3-202ENST00000361373 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
LDB3-202ENST00000361373 KIF1BPQ96EK5 621 aa16.08■□□□□ 0.16
LDB3-202ENST00000361373 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
LDB3-202ENST00000361373 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 AEBP1Q8IUX7 1158 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 EMILIN1Q9Y6C2 1016 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
LDB3-202ENST00000361373 MCM10Q7L590 875 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 TXLNAP40222 546 aa16.07■□□□□ 0.16
LDB3-202ENST00000361373 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
LDB3-202ENST00000361373 EXOC5O00471 708 aa16.06■□□□□ 0.16
LDB3-202ENST00000361373 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
LDB3-202ENST00000361373 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
LDB3-202ENST00000361373 MSH6P52701 1360 aa16.05■□□□□ 0.16
LDB3-202ENST00000361373 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
LDB3-202ENST00000361373 ACEP12821 1306 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms