RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
CCDC197-201ENST00000359253 IL13P35225 146 aa17.72■□□□□ 0.43
CCDC197-201ENST00000359253 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
CCDC197-201ENST00000359253 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
CCDC197-201ENST00000359253 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
CCDC197-201ENST00000359253 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
CCDC197-201ENST00000359253 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
CCDC197-201ENST00000359253 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
CCDC197-201ENST00000359253 E9PSI1 815 aa17.71■□□□□ 0.43
CCDC197-201ENST00000359253 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
CCDC197-201ENST00000359253 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
CCDC197-201ENST00000359253 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
CCDC197-201ENST00000359253 ZNF772Q68DY9 489 aaPredicted RBP17.7■□□□□ 0.42
CCDC197-201ENST00000359253 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
CCDC197-201ENST00000359253 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
CCDC197-201ENST00000359253 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
CCDC197-201ENST00000359253 ALS2Q96Q42 1657 aa17.69■□□□□ 0.42
CCDC197-201ENST00000359253 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
CCDC197-201ENST00000359253 RRS1Q15050 365 aaKnown RBP17.69■□□□□ 0.42
CCDC197-201ENST00000359253 TRMT2AQ8IZ69 625 aaKnown RBP17.69■□□□□ 0.42
CCDC197-201ENST00000359253 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
CCDC197-201ENST00000359253 MED1Q15648 1581 aaPredicted RBP17.69■□□□□ 0.42
CCDC197-201ENST00000359253 FLT4P35916 1363 aa17.68■□□□□ 0.42
CCDC197-201ENST00000359253 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
CCDC197-201ENST00000359253 WWC1Q8IX03 1113 aa17.68■□□□□ 0.42
CCDC197-201ENST00000359253 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
CCDC197-201ENST00000359253 GCP02774 474 aa17.67■□□□□ 0.42
CCDC197-201ENST00000359253 LRP6O75581 1613 aa17.67■□□□□ 0.42
CCDC197-201ENST00000359253 USP19O94966 1318 aa17.67■□□□□ 0.42
CCDC197-201ENST00000359253 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
CCDC197-201ENST00000359253 FBLN1P23142 703 aa17.66■□□□□ 0.42
CCDC197-201ENST00000359253 FKBP8Q14318 412 aa17.66■□□□□ 0.42
CCDC197-201ENST00000359253 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
CCDC197-201ENST00000359253 RSPH6AQ9H0K4 717 aa17.66■□□□□ 0.42
CCDC197-201ENST00000359253 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
CCDC197-201ENST00000359253 AMPHP49418 695 aa17.65■□□□□ 0.42
CCDC197-201ENST00000359253 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
CCDC197-201ENST00000359253 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
CCDC197-201ENST00000359253 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
CCDC197-201ENST00000359253 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
CCDC197-201ENST00000359253 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
CCDC197-201ENST00000359253 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
CCDC197-201ENST00000359253 IL16Q14005 1332 aa17.64■□□□□ 0.41
CCDC197-201ENST00000359253 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
CCDC197-201ENST00000359253 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
CCDC197-201ENST00000359253 MARF1Q9Y4F3 1742 aaKnown RBP17.62■□□□□ 0.41
CCDC197-201ENST00000359253 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
CCDC197-201ENST00000359253 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
CCDC197-201ENST00000359253 AFF2P51816 1311 aa17.62■□□□□ 0.41
CCDC197-201ENST00000359253 CPDO75976 1380 aa17.62■□□□□ 0.41
CCDC197-201ENST00000359253 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
CCDC197-201ENST00000359253 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
CCDC197-201ENST00000359253 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
CCDC197-201ENST00000359253 USP21Q9UK80 565 aa17.61■□□□□ 0.41
CCDC197-201ENST00000359253 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CCDC197-201ENST00000359253 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
CCDC197-201ENST00000359253 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
CCDC197-201ENST00000359253 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
CCDC197-201ENST00000359253 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
CCDC197-201ENST00000359253 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
CCDC197-201ENST00000359253 HOXC9P31274 260 aa17.59■□□□□ 0.41
CCDC197-201ENST00000359253 RIPK4P57078 832 aa17.59■□□□□ 0.41
CCDC197-201ENST00000359253 IP6K1Q92551 441 aa17.59■□□□□ 0.41
CCDC197-201ENST00000359253 QTRT2Q9H974 415 aaKnown RBP17.59■□□□□ 0.41
CCDC197-201ENST00000359253 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
CCDC197-201ENST00000359253 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
CCDC197-201ENST00000359253 NFAT5O94916 1531 aa17.58■□□□□ 0.41
CCDC197-201ENST00000359253 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.4
CCDC197-201ENST00000359253 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
CCDC197-201ENST00000359253 NEUROD2Q15784 382 aa17.58■□□□□ 0.4
CCDC197-201ENST00000359253 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
CCDC197-201ENST00000359253 SLIT2O94813 1529 aa17.57■□□□□ 0.4
CCDC197-201ENST00000359253 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
CCDC197-201ENST00000359253 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
CCDC197-201ENST00000359253 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
CCDC197-201ENST00000359253 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
CCDC197-201ENST00000359253 KDRP35968 1356 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 HMOX1P09601 288 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 RRP1P56182 461 aaKnown RBP17.56■□□□□ 0.4
CCDC197-201ENST00000359253 POTEAQ6S8J7 498 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
CCDC197-201ENST00000359253 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
CCDC197-201ENST00000359253 SOX12O15370 315 aa17.55■□□□□ 0.4
CCDC197-201ENST00000359253 RXRBP28702 533 aa17.55■□□□□ 0.4
CCDC197-201ENST00000359253 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
CCDC197-201ENST00000359253 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
CCDC197-201ENST00000359253 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
CCDC197-201ENST00000359253 VPS72Q15906 364 aa17.54■□□□□ 0.4
CCDC197-201ENST00000359253 CRYBG1Q9Y4K1 1723 aa17.54■□□□□ 0.4
CCDC197-201ENST00000359253 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
CCDC197-201ENST00000359253 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
CCDC197-201ENST00000359253 EVA1CP58658 441 aa17.52■□□□□ 0.4
CCDC197-201ENST00000359253 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
CCDC197-201ENST00000359253 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
CCDC197-201ENST00000359253 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
CCDC197-201ENST00000359253 ABCA3Q99758 1704 aa17.52■□□□□ 0.39
CCDC197-201ENST00000359253 LTN1O94822 1766 aa17.51■□□□□ 0.39
CCDC197-201ENST00000359253 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms