RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
FN1-205ENST00000357867 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
FN1-205ENST00000357867 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
FN1-205ENST00000357867 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
FN1-205ENST00000357867 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
FN1-205ENST00000357867 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
FN1-205ENST00000357867 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
FN1-205ENST00000357867 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
FN1-205ENST00000357867 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
FN1-205ENST00000357867 EXOC5O00471 708 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
FN1-205ENST00000357867 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
FN1-205ENST00000357867 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 OFD1O75665 1012 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
FN1-205ENST00000357867 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
FN1-205ENST00000357867 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 PDCP20941 246 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 KRT18P05783 430 aaKnown RBP13.13□□□□□ -0.31
FN1-205ENST00000357867 CT47B1P0C2W7 299 aaPredicted RBP13.13□□□□□ -0.31
FN1-205ENST00000357867 SYCP1Q15431 976 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
FN1-205ENST00000357867 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
FN1-205ENST00000357867 CCDC69A6NI79 296 aa13.12□□□□□ -0.31
FN1-205ENST00000357867 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
FN1-205ENST00000357867 TCP11L2Q8N4U5 519 aa13.12□□□□□ -0.31
FN1-205ENST00000357867 FOSBP53539 338 aa13.12□□□□□ -0.31
FN1-205ENST00000357867 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
FN1-205ENST00000357867 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
FN1-205ENST00000357867 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
FN1-205ENST00000357867 AK7Q96M32 723 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
FN1-205ENST00000357867 NUCB2P80303 420 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
FN1-205ENST00000357867 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 GPS2Q13227 327 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 ANKRD1Q15327 319 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
FN1-205ENST00000357867 TDO2P48775 406 aa13.1□□□□□ -0.31
FN1-205ENST00000357867 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
FN1-205ENST00000357867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
FN1-205ENST00000357867 MCM2P49736 904 aa13.1□□□□□ -0.31
FN1-205ENST00000357867 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
FN1-205ENST00000357867 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
FN1-205ENST00000357867 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
FN1-205ENST00000357867 CDC45O75419 566 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 SIL1Q9H173 461 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
FN1-205ENST00000357867 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 NSD3Q9BZ95 1437 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 CHMP5Q9NZZ3 219 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 TNIP1Q15025 636 aa13.09□□□□□ -0.31
FN1-205ENST00000357867 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.31
FN1-205ENST00000357867 PTCD1O75127 700 aaKnown RBP13.08□□□□□ -0.31
FN1-205ENST00000357867 ST5P78524 1137 aa13.08□□□□□ -0.31
FN1-205ENST00000357867 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.31
FN1-205ENST00000357867 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.31
FN1-205ENST00000357867 MYO6Q9UM54 1294 aa13.08□□□□□ -0.31
FN1-205ENST00000357867 FOXO3O43524 673 aa13.08□□□□□ -0.32
FN1-205ENST00000357867 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
FN1-205ENST00000357867 RFC4P35249 363 aa13.08□□□□□ -0.32
FN1-205ENST00000357867 TNRQ92752 1358 aa13.08□□□□□ -0.32
FN1-205ENST00000357867 DESP17661 470 aa13.08□□□□□ -0.32
FN1-205ENST00000357867 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
FN1-205ENST00000357867 EIF2AK4Q9P2K8 1649 aaKnown RBP13.07□□□□□ -0.32
FN1-205ENST00000357867 FCHSD2O94868 740 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 ZNF76P36508 570 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
FN1-205ENST00000357867 JMYQ8N9B5 988 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
FN1-205ENST00000357867 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 CDKL5O76039 1030 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 STIM1Q13586 685 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
FN1-205ENST00000357867 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
FN1-205ENST00000357867 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
FN1-205ENST00000357867 UBAC1Q9BSL1 405 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms