RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
RTFDC1-202ENST00000357348 USP31Q70CQ4 1352 aa16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-202ENST00000357348 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
RTFDC1-202ENST00000357348 AATKQ6ZMQ8 1374 aa16.4■□□□□ 0.22
RTFDC1-202ENST00000357348 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.22
RTFDC1-202ENST00000357348 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.22
RTFDC1-202ENST00000357348 AMPHP49418 695 aa16.39■□□□□ 0.21
RTFDC1-202ENST00000357348 PXDNQ92626 1479 aa16.39■□□□□ 0.21
RTFDC1-202ENST00000357348 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
RTFDC1-202ENST00000357348 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
RTFDC1-202ENST00000357348 PLIN1O60240 522 aa16.38■□□□□ 0.21
RTFDC1-202ENST00000357348 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-202ENST00000357348 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
RTFDC1-202ENST00000357348 GCP02774 474 aa16.37■□□□□ 0.21
RTFDC1-202ENST00000357348 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
RTFDC1-202ENST00000357348 LTN1O94822 1766 aa16.37■□□□□ 0.21
RTFDC1-202ENST00000357348 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
RTFDC1-202ENST00000357348 HMOX1P09601 288 aa16.36■□□□□ 0.21
RTFDC1-202ENST00000357348 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
RTFDC1-202ENST00000357348 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
RTFDC1-202ENST00000357348 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
RTFDC1-202ENST00000357348 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
RTFDC1-202ENST00000357348 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
RTFDC1-202ENST00000357348 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
RTFDC1-202ENST00000357348 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
RTFDC1-202ENST00000357348 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 APAF1O14727 1248 aa16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
RTFDC1-202ENST00000357348 SBNO1A3KN83 1393 aa16.33■□□□□ 0.21
RTFDC1-202ENST00000357348 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.21
RTFDC1-202ENST00000357348 IL13P35225 146 aa16.33■□□□□ 0.2
RTFDC1-202ENST00000357348 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
RTFDC1-202ENST00000357348 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
RTFDC1-202ENST00000357348 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
RTFDC1-202ENST00000357348 NHSL1Q5SYE7 1610 aa16.33■□□□□ 0.2
RTFDC1-202ENST00000357348 TOM1O60784 492 aa16.32■□□□□ 0.2
RTFDC1-202ENST00000357348 HOXC9P31274 260 aa16.32■□□□□ 0.2
RTFDC1-202ENST00000357348 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
RTFDC1-202ENST00000357348 NFAT5O94916 1531 aa16.32■□□□□ 0.2
RTFDC1-202ENST00000357348 FLT4P35916 1363 aa16.31■□□□□ 0.2
RTFDC1-202ENST00000357348 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
RTFDC1-202ENST00000357348 USP19O94966 1318 aa16.31■□□□□ 0.2
RTFDC1-202ENST00000357348 GSE1Q14687 1217 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 CHRNA2Q15822 529 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
RTFDC1-202ENST00000357348 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
RTFDC1-202ENST00000357348 ANO8Q9HCE9 1232 aaPredicted RBP16.29■□□□□ 0.2
RTFDC1-202ENST00000357348 SLIT3O75094 1523 aa16.29■□□□□ 0.2
RTFDC1-202ENST00000357348 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
RTFDC1-202ENST00000357348 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
RTFDC1-202ENST00000357348 PHRF1Q9P1Y6 1649 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
RTFDC1-202ENST00000357348 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
RTFDC1-202ENST00000357348 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.19
RTFDC1-202ENST00000357348 IP6K1Q92551 441 aa16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 PHLPP1O60346 1717 aa16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
RTFDC1-202ENST00000357348 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 CRYBG1Q9Y4K1 1723 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 LRRC59Q96AG4 307 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 PHACTR3Q96KR7 559 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 EYA1Q99502 592 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 KIAA0232Q92628 1395 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 SLFN5Q08AF3 891 aa16.25■□□□□ 0.19
RTFDC1-202ENST00000357348 FCHSD2O94868 740 aa16.23■□□□□ 0.19
RTFDC1-202ENST00000357348 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-202ENST00000357348 AHDC1Q5TGY3 1603 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-202ENST00000357348 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
RTFDC1-202ENST00000357348 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
RTFDC1-202ENST00000357348 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
RTFDC1-202ENST00000357348 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
RTFDC1-202ENST00000357348 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
RTFDC1-202ENST00000357348 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
RTFDC1-202ENST00000357348 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
RTFDC1-202ENST00000357348 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.18
RTFDC1-202ENST00000357348 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
RTFDC1-202ENST00000357348 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 RIPK4P57078 832 aa16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 IQSEC2Q5JU85 1478 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms