RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 AATKQ6ZMQ8 1374 aa31.67■■■□□ 2.66
HDGF-201ENST00000357325 MON2Q7Z3U7 1717 aa31.66■■■□□ 2.66
HDGF-201ENST00000357325 IPO8O15397 1037 aaKnown RBP31.66■■■□□ 2.66
HDGF-201ENST00000357325 FRAT2O75474 233 aaPredicted RBP31.66■■■□□ 2.66
HDGF-201ENST00000357325 CEBPAP49715 358 aaPredicted RBP31.66■■■□□ 2.66
HDGF-201ENST00000357325 AEBP1Q8IUX7 1158 aa31.65■■■□□ 2.66
HDGF-201ENST00000357325 MRPL50Q8N5N7 158 aaKnown RBP31.65■■■□□ 2.66
HDGF-201ENST00000357325 TBC1D32Q96NH3 1257 aa31.65■■■□□ 2.66
HDGF-201ENST00000357325 SMC5Q8IY18 1101 aa31.64■■■□□ 2.66
HDGF-201ENST00000357325 KNDC1Q76NI1 1749 aa31.64■■■□□ 2.66
HDGF-201ENST00000357325 ADAMTS13Q76LX8 1427 aa31.64■■■□□ 2.66
HDGF-201ENST00000357325 ZNF853P0CG23 659 aa31.64■■■□□ 2.65
HDGF-201ENST00000357325 C1orf115Q9H7X2 142 aa31.64■■■□□ 2.65
HDGF-201ENST00000357325 C3P01024 1663 aa31.63■■■□□ 2.65
HDGF-201ENST00000357325 C8orf58Q8NAV2 365 aa31.63■■■□□ 2.65
HDGF-201ENST00000357325 UBR1Q8IWV7 1749 aa31.62■■■□□ 2.65
HDGF-201ENST00000357325 DLG5Q8TDM6 1919 aa31.62■■■□□ 2.65
HDGF-201ENST00000357325 SIRT1Q96EB6 747 aa31.62■■■□□ 2.65
HDGF-201ENST00000357325 PLPPR3Q6T4P5 718 aa31.61■■■□□ 2.65
HDGF-201ENST00000357325 SLC26A8Q96RN1 970 aa31.61■■■□□ 2.65
HDGF-201ENST00000357325 IFT57Q9NWB7 429 aa31.61■■■□□ 2.65
HDGF-201ENST00000357325 AKAP12Q02952 1782 aa31.61■■■□□ 2.65
HDGF-201ENST00000357325 HDGFP51858 240 aaKnown RBP31.6■■■□□ 2.65
HDGF-201ENST00000357325 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.6■■■□□ 2.65
HDGF-201ENST00000357325 GNAI1P63096 354 aa31.59■■■□□ 2.65
HDGF-201ENST00000357325 SLKQ9H2G2 1235 aaPredicted RBP31.59■■■□□ 2.65
HDGF-201ENST00000357325 ACEP12821 1306 aa31.58■■■□□ 2.65
HDGF-201ENST00000357325 SOX12O15370 315 aa31.58■■■□□ 2.65
HDGF-201ENST00000357325 ZBTB7BO15156 539 aaPredicted RBP31.58■■■□□ 2.65
HDGF-201ENST00000357325 LNPKQ9C0E8 428 aa31.58■■■□□ 2.65
HDGF-201ENST00000357325 ITSN1Q15811 1721 aa31.57■■■□□ 2.64
HDGF-201ENST00000357325 BRPF1P55201 1214 aaPredicted RBP31.57■■■□□ 2.64
HDGF-201ENST00000357325 EIF4A2Q14240 407 aaKnown RBP31.57■■■□□ 2.64
HDGF-201ENST00000357325 TWISTNBQ3B726 338 aaPredicted RBP31.57■■■□□ 2.64
HDGF-201ENST00000357325 TTC21BQ7Z4L5 1316 aa31.56■■■□□ 2.64
HDGF-201ENST00000357325 ZNF692Q9BU19 519 aaPredicted RBP31.56■■■□□ 2.64
HDGF-201ENST00000357325 UPF2Q9HAU5 1272 aaKnown RBP31.56■■■□□ 2.64
HDGF-201ENST00000357325 MFAP1P55081 439 aaKnown RBP31.56■■■□□ 2.64
HDGF-201ENST00000357325 SULT6B1Q6IMI4 303 aa31.55■■■□□ 2.64
HDGF-201ENST00000357325 CFAP44Q96MT7 982 aa31.54■■■□□ 2.64
HDGF-201ENST00000357325 KRT24Q2M2I5 525 aa31.54■■■□□ 2.64
HDGF-201ENST00000357325 TBC1D2Q9BYX2 928 aa31.54■■■□□ 2.64
HDGF-201ENST00000357325 NUCB1Q02818 461 aa31.53■■■□□ 2.64
HDGF-201ENST00000357325 CALD1Q05682 793 aaKnown RBP31.53■■■□□ 2.64
HDGF-201ENST00000357325 PTPRUQ92729 1446 aa31.52■■■□□ 2.64
HDGF-201ENST00000357325 HSP90AB2PQ58FF8 381 aa31.52■■■□□ 2.64
HDGF-201ENST00000357325 ZNF428Q96B54 188 aa31.52■■■□□ 2.64
HDGF-201ENST00000357325 BECN1Q14457 450 aa31.51■■■□□ 2.63
HDGF-201ENST00000357325 PTCH1Q13635 1447 aa31.51■■■□□ 2.63
HDGF-201ENST00000357325 GSE1Q14687 1217 aa31.5■■■□□ 2.63
HDGF-201ENST00000357325 SIRT2Q8IXJ6 389 aa31.5■■■□□ 2.63
HDGF-201ENST00000357325 SPRYD3Q8NCJ5 442 aa31.49■■■□□ 2.63
HDGF-201ENST00000357325 MCM10Q7L590 875 aa31.48■■■□□ 2.63
HDGF-201ENST00000357325 CHD1LQ86WJ1 897 aa31.48■■■□□ 2.63
HDGF-201ENST00000357325 ABCC4O15439 1325 aa31.47■■■□□ 2.63
HDGF-201ENST00000357325 ARHGAP45Q92619 1136 aa31.47■■■□□ 2.63
HDGF-201ENST00000357325 C22orf23Q9BZE7 217 aa31.47■■■□□ 2.63
HDGF-201ENST00000357325 NRKQ7Z2Y5 1582 aa31.47■■■□□ 2.63
HDGF-201ENST00000357325 PIK3R4Q99570 1358 aa31.47■■■□□ 2.63
HDGF-201ENST00000357325 ANTXR1Q9H6X2 564 aa31.46■■■□□ 2.63
HDGF-201ENST00000357325 OVOS2A0A0J9YW53 1432 aa31.46■■■□□ 2.63
HDGF-201ENST00000357325 OVOS2Q6IE36 1432 aa31.46■■■□□ 2.63
HDGF-201ENST00000357325 PLEKHG1Q9ULL1 1385 aa31.46■■■□□ 2.63
HDGF-201ENST00000357325 LMOD3Q0VAK6 560 aa31.45■■■□□ 2.63
HDGF-201ENST00000357325 PEAK1Q9H792 1746 aa31.45■■■□□ 2.63
HDGF-201ENST00000357325 PLEKHG3A1L390 1219 aa31.45■■■□□ 2.62
HDGF-201ENST00000357325 ANKRD45Q5TZF3 282 aa31.44■■■□□ 2.62
HDGF-201ENST00000357325 USP6P35125 1406 aa31.44■■■□□ 2.62
HDGF-201ENST00000357325 TOPAZ1Q8N9V7 1692 aa31.42■■■□□ 2.62
HDGF-201ENST00000357325 AMOTL2Q9Y2J4 779 aa31.42■■■□□ 2.62
HDGF-201ENST00000357325 IL27Q8NEV9 243 aa31.39■■■□□ 2.62
HDGF-201ENST00000357325 FOXO3O43524 673 aa31.38■■■□□ 2.61
HDGF-201ENST00000357325 MIS18AQ9NYP9 233 aa31.38■■■□□ 2.61
HDGF-201ENST00000357325 MAP3K19Q56UN5 1328 aa31.35■■■□□ 2.61
HDGF-201ENST00000357325 SSH2Q76I76 1423 aa31.35■■■□□ 2.61
HDGF-201ENST00000357325 CHL1O00533 1208 aa31.34■■■□□ 2.61
HDGF-201ENST00000357325 API5Q9BZZ5 524 aaKnown RBP31.33■■■□□ 2.61
HDGF-201ENST00000357325 EID1Q9Y6B2 187 aa31.33■■■□□ 2.61
HDGF-201ENST00000357325 USP31Q70CQ4 1352 aa31.33■■■□□ 2.61
HDGF-201ENST00000357325 GCC1Q96CN9 775 aa31.32■■■□□ 2.61
HDGF-201ENST00000357325 RIMS1Q86UR5 1692 aaKnown RBP31.32■■■□□ 2.6
HDGF-201ENST00000357325 NALCNQ8IZF0 1738 aa31.32■■■□□ 2.6
HDGF-201ENST00000357325 RGPD8O14715 1765 aaPredicted RBP31.31■■■□□ 2.6
HDGF-201ENST00000357325 RGS12O14924 1447 aa31.3■■■□□ 2.6
HDGF-201ENST00000357325 RGPD1P0DJD0 1748 aa31.3■■■□□ 2.6
HDGF-201ENST00000357325 MTHFSDQ2M296 383 aaKnown RBP31.28■■■□□ 2.6
HDGF-201ENST00000357325 BMP2KLQ5H9B9 411 aa31.28■■■□□ 2.6
HDGF-201ENST00000357325 NGDNQ8NEJ9 315 aaKnown RBP31.28■■■□□ 2.6
HDGF-201ENST00000357325 NUTM2GQ5VZR2 741 aa31.27■■■□□ 2.6
HDGF-201ENST00000357325 BRPF3Q9ULD4 1205 aa31.27■■■□□ 2.6
HDGF-201ENST00000357325 CRB1P82279 1406 aa31.26■■■□□ 2.59
HDGF-201ENST00000357325 CHMP4BQ9H444 224 aaKnown RBP31.25■■■□□ 2.59
HDGF-201ENST00000357325 TBX22Q9Y458 520 aa31.24■■■□□ 2.59
HDGF-201ENST00000357325 INTS3Q68E01 1043 aaKnown RBP31.23■■■□□ 2.59
HDGF-201ENST00000357325 C16orf71Q8IYS4 520 aaPredicted RBP31.23■■■□□ 2.59
HDGF-201ENST00000357325 EYA1Q99502 592 aa31.23■■■□□ 2.59
HDGF-201ENST00000357325 RBM25P49756 843 aaKnown RBP31.22■■■□□ 2.59
HDGF-201ENST00000357325 TBC1D9Q6ZT07 1266 aa31.22■■■□□ 2.59
HDGF-201ENST00000357325 RTN4Q9NQC3 1192 aaKnown RBP31.22■■■□□ 2.59
HDGF-201ENST00000357325 ARHGAP23Q9P227 1491 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms