RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
CDC42SE1-201ENST00000357235 DCTN1Q14203 1278 aa10.15□□□□□ -0.79
CDC42SE1-201ENST00000357235 C16orf71Q8IYS4 520 aaPredicted RBP10.15□□□□□ -0.79
CDC42SE1-201ENST00000357235 GCC1Q96CN9 775 aa10.15□□□□□ -0.79
CDC42SE1-201ENST00000357235 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.79
CDC42SE1-201ENST00000357235 NPATQ14207 1427 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 UQCRHLA0A096LP55 91 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 UQCRHP07919 91 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 KIF1BO60333 1816 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 FAM83GA6ND36 823 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 RAPGEF3O95398 923 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 IDI1Q13907 227 aa10.14□□□□□ -0.79
CDC42SE1-201ENST00000357235 NSD2O96028 1365 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 CDC45O75419 566 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 ZSCAN20P17040 1043 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 DDIT3P35638 169 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 PPIP5K1Q6PFW1 1433 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 VAMP4O75379 141 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 KIF20AO95235 890 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 BAG4O95429 457 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 PKP1Q13835 747 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 CHAMP1Q96JM3 812 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 MROH2AA6NES4 1674 aa10.13□□□□□ -0.79
CDC42SE1-201ENST00000357235 DYNC1I1O14576 645 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 FCHSD2O94868 740 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 CDK19Q9BWU1 502 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 DIP2BQ9P265 1576 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 IL16Q14005 1332 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 KIAA1210Q9ULL0 1709 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 NOL8Q76FK4 1167 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 CCDC94Q9BW85 323 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 MBIPQ9NS73 344 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 QRICH2Q9H0J4 1663 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 SMARCA5O60264 1052 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 OTUD7AQ8TE49 926 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-201ENST00000357235 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 GSPT1P15170 499 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 RPGRIP1LQ68CZ1 1315 aa10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 SOX12O15370 315 aa10.11□□□□□ -0.79
CDC42SE1-201ENST00000357235 RRS1Q15050 365 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 NFE2L2Q16236 605 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 DEPDC5O75140 1603 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 GNAI1P63096 354 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 PPRC1Q5VV67 1664 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 TULP4Q9NRJ4 1543 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
CDC42SE1-201ENST00000357235 PTMSP20962 102 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 KLHL40Q2TBA0 621 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 NCOA3Q9Y6Q9 1424 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 LETM1O95202 739 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 RNF214Q8ND24 703 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 PPP1R9BQ96SB3 815 aa10.09□□□□□ -0.79
CDC42SE1-201ENST00000357235 CDK11BP21127 795 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 RABEP1Q15276 862 aa10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 CASC1Q6TDU7 716 aa10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 MROH1Q8NDA8 1641 aa10.08□□□□□ -0.8
CDC42SE1-201ENST00000357235 ST18O60284 1047 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 ZSCAN23Q3MJ62 389 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 NME9Q86XW9 330 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 INO80Q9ULG1 1556 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 NUCB2P80303 420 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 TSHZ3Q63HK5 1081 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 MPNDQ8N594 471 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 SETBP1Q9Y6X0 1596 aa10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 TAF3Q5VWG9 929 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms