RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 NUP160Q12769 1436 aa15.2■□□□□ 0.02
BDNF-202ENST00000356660 NPHP1O15259 732 aa15.2■□□□□ 0.02
BDNF-202ENST00000356660 LMOD3Q0VAK6 560 aa15.2■□□□□ 0.02
BDNF-202ENST00000356660 ERC2O15083 957 aa15.19■□□□□ 0.02
BDNF-202ENST00000356660 TSHZ3Q63HK5 1081 aa15.19■□□□□ 0.02
BDNF-202ENST00000356660 TSC1Q92574 1164 aa15.19■□□□□ 0.02
BDNF-202ENST00000356660 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
BDNF-202ENST00000356660 IFT140Q96RY7 1462 aa15.18■□□□□ 0.02
BDNF-202ENST00000356660 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
BDNF-202ENST00000356660 VPS37CA5D8V6 355 aaPredicted RBP15.18■□□□□ 0.02
BDNF-202ENST00000356660 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
BDNF-202ENST00000356660 TSPYL6Q8N831 410 aa15.17■□□□□ 0.02
BDNF-202ENST00000356660 GOLGA6L6A8MZA4 724 aa15.17■□□□□ 0.02
BDNF-202ENST00000356660 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
BDNF-202ENST00000356660 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
BDNF-202ENST00000356660 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 DYNC1I1O14576 645 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
BDNF-202ENST00000356660 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 NOL7Q9UMY1 257 aaKnown RBP15.16■□□□□ 0.02
BDNF-202ENST00000356660 PLA2R1Q13018 1463 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 TTC12Q9H892 705 aaPredicted RBP15.16■□□□□ 0.02
BDNF-202ENST00000356660 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
BDNF-202ENST00000356660 DHX37Q8IY37 1157 aaKnown RBP15.15■□□□□ 0.02
BDNF-202ENST00000356660 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 IGSF3O75054 1194 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
BDNF-202ENST00000356660 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 SDSP20132 328 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 IFT57Q9NWB7 429 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
BDNF-202ENST00000356660 ATAD2Q6PL18 1390 aa15.14■□□□□ 0.01
BDNF-202ENST00000356660 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
BDNF-202ENST00000356660 LMBRD1Q9NUN5 540 aa15.14■□□□□ 0.01
BDNF-202ENST00000356660 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
BDNF-202ENST00000356660 SMC3Q9UQE7 1217 aa15.14■□□□□ 0.01
BDNF-202ENST00000356660 MAP4K4O95819 1239 aaPredicted RBP15.14■□□□□ 0.01
BDNF-202ENST00000356660 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
BDNF-202ENST00000356660 FAM83GA6ND36 823 aa15.13■□□□□ 0.01
BDNF-202ENST00000356660 TTC22Q5TAA0 569 aa15.13■□□□□ 0.01
BDNF-202ENST00000356660 ZBTB7BO15156 539 aaPredicted RBP15.13■□□□□ 0.01
BDNF-202ENST00000356660 FCHSD2O94868 740 aa15.13■□□□□ 0.01
BDNF-202ENST00000356660 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
BDNF-202ENST00000356660 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
BDNF-202ENST00000356660 CEP170Q5SW79 1584 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 TMEM63CQ9P1W3 806 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
BDNF-202ENST00000356660 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
BDNF-202ENST00000356660 TEFQ10587 303 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 PPP4R3BQ5MIZ7 849 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 ZNF445P59923 1031 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
BDNF-202ENST00000356660 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
BDNF-202ENST00000356660 NOS1P29475 1434 aa15.11■□□□□ 0.01
BDNF-202ENST00000356660 DTNBO60941 627 aa15.11■□□□□ 0.01
BDNF-202ENST00000356660 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
BDNF-202ENST00000356660 MIS18AQ9NYP9 233 aa15.11■□□□□ 0.01
BDNF-202ENST00000356660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
BDNF-202ENST00000356660 ADCY5O95622 1261 aa15.1■□□□□ 0.01
BDNF-202ENST00000356660 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
BDNF-202ENST00000356660 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
BDNF-202ENST00000356660 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
BDNF-202ENST00000356660 USP26Q9BXU7 913 aa15.1■□□□□ 0.01
BDNF-202ENST00000356660 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
BDNF-202ENST00000356660 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 MCM5P33992 734 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 MCM2P49736 904 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 HS1BP3Q53T59 392 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 C8orf58Q8NAV2 365 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 ABCC2Q92887 1545 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
BDNF-202ENST00000356660 F6X3S4 739 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 VAMP4O75379 141 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 NLRP6P59044 892 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 EMILIN1Q9Y6C2 1016 aa15.09■□□□□ 0.01
BDNF-202ENST00000356660 WDR33Q9C0J8 1336 aaKnown RBP15.09■□□□□ 0.01
BDNF-202ENST00000356660 NOLC1Q14978 699 aaKnown RBP eCLIP15.08■□□□□ 0.01
BDNF-202ENST00000356660 MRPL50Q8N5N7 158 aaKnown RBP15.08■□□□□ 0.01
BDNF-202ENST00000356660 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0.01
BDNF-202ENST00000356660 GPT2Q8TD30 523 aa15.08■□□□□ 0
BDNF-202ENST00000356660 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
BDNF-202ENST00000356660 FYB1O15117 783 aa15.08■□□□□ 0
BDNF-202ENST00000356660 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0
BDNF-202ENST00000356660 FBXW7Q969H0 707 aa15.08■□□□□ 0
BDNF-202ENST00000356660 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
BDNF-202ENST00000356660 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0
BDNF-202ENST00000356660 GSPT1P15170 499 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms