RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 VAMP4O75379 141 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDKL1-202ENST00000356146 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
CDKL1-202ENST00000356146 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
CDKL1-202ENST00000356146 CFAP44Q96MT7 982 aa17.09■□□□□ 0.33
CDKL1-202ENST00000356146 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
CDKL1-202ENST00000356146 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
CDKL1-202ENST00000356146 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
CDKL1-202ENST00000356146 GNAI1P63096 354 aa17.08■□□□□ 0.32
CDKL1-202ENST00000356146 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
CDKL1-202ENST00000356146 STK26Q9P289 416 aa17.08■□□□□ 0.32
CDKL1-202ENST00000356146 UBE2Q2Q8WVN8 375 aa17.07■□□□□ 0.32
CDKL1-202ENST00000356146 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
CDKL1-202ENST00000356146 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
CDKL1-202ENST00000356146 CDK19Q9BWU1 502 aa17.07■□□□□ 0.32
CDKL1-202ENST00000356146 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
CDKL1-202ENST00000356146 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
CDKL1-202ENST00000356146 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
CDKL1-202ENST00000356146 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
CDKL1-202ENST00000356146 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
CDKL1-202ENST00000356146 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
CDKL1-202ENST00000356146 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
CDKL1-202ENST00000356146 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
CDKL1-202ENST00000356146 CABP1Q9NZU7 370 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
CDKL1-202ENST00000356146 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 SIRT2Q8IXJ6 389 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 CDC45O75419 566 aa17.04■□□□□ 0.32
CDKL1-202ENST00000356146 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
CDKL1-202ENST00000356146 RAPGEF3O95398 923 aa17.02■□□□□ 0.32
CDKL1-202ENST00000356146 IL13P35225 146 aa17.02■□□□□ 0.32
CDKL1-202ENST00000356146 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.31
CDKL1-202ENST00000356146 KNDC1Q76NI1 1749 aa17.02■□□□□ 0.31
CDKL1-202ENST00000356146 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
CDKL1-202ENST00000356146 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
CDKL1-202ENST00000356146 MON2Q7Z3U7 1717 aa17■□□□□ 0.31
CDKL1-202ENST00000356146 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
CDKL1-202ENST00000356146 TSPYL6Q8N831 410 aa17■□□□□ 0.31
CDKL1-202ENST00000356146 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
CDKL1-202ENST00000356146 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
CDKL1-202ENST00000356146 RABEP1Q15276 862 aa16.99■□□□□ 0.31
CDKL1-202ENST00000356146 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
CDKL1-202ENST00000356146 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
CDKL1-202ENST00000356146 ESPNB1AK53 854 aa16.98■□□□□ 0.31
CDKL1-202ENST00000356146 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
CDKL1-202ENST00000356146 KLHL40Q2TBA0 621 aa16.97■□□□□ 0.31
CDKL1-202ENST00000356146 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
CDKL1-202ENST00000356146 ARXQ96QS3 562 aa16.97■□□□□ 0.31
CDKL1-202ENST00000356146 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
CDKL1-202ENST00000356146 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
CDKL1-202ENST00000356146 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
CDKL1-202ENST00000356146 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
CDKL1-202ENST00000356146 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
CDKL1-202ENST00000356146 ATP10DQ9P241 1426 aa16.96■□□□□ 0.31
CDKL1-202ENST00000356146 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
CDKL1-202ENST00000356146 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
CDKL1-202ENST00000356146 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.3
CDKL1-202ENST00000356146 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 C3P01024 1663 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 PPP1R9BQ96SB3 815 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
CDKL1-202ENST00000356146 RGS12O14924 1447 aa16.95■□□□□ 0.3
CDKL1-202ENST00000356146 AGLP35573 1532 aa16.94■□□□□ 0.3
CDKL1-202ENST00000356146 HMOX1P09601 288 aa16.94■□□□□ 0.3
CDKL1-202ENST00000356146 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
CDKL1-202ENST00000356146 NUCB2P80303 420 aa16.94■□□□□ 0.3
CDKL1-202ENST00000356146 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
CDKL1-202ENST00000356146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDKL1-202ENST00000356146 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
CDKL1-202ENST00000356146 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
CDKL1-202ENST00000356146 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
CDKL1-202ENST00000356146 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
CDKL1-202ENST00000356146 SSFA2P28290 1259 aa16.93■□□□□ 0.3
CDKL1-202ENST00000356146 RPAP2Q8IXW5 612 aaPredicted RBP16.93■□□□□ 0.3
CDKL1-202ENST00000356146 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
CDKL1-202ENST00000356146 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
CDKL1-202ENST00000356146 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
CDKL1-202ENST00000356146 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
CDKL1-202ENST00000356146 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
CDKL1-202ENST00000356146 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
CDKL1-202ENST00000356146 ZNF445P59923 1031 aa16.92■□□□□ 0.3
CDKL1-202ENST00000356146 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
CDKL1-202ENST00000356146 NAP1L5Q96NT1 182 aaPredicted RBP16.91■□□□□ 0.3
CDKL1-202ENST00000356146 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
CDKL1-202ENST00000356146 TECPR2O15040 1411 aa16.91■□□□□ 0.3
CDKL1-202ENST00000356146 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
CDKL1-202ENST00000356146 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
CDKL1-202ENST00000356146 CPS1P31327 1500 aa16.9■□□□□ 0.3
CDKL1-202ENST00000356146 PTPRCP08575 1304 aa16.9■□□□□ 0.3
CDKL1-202ENST00000356146 FBLN1P23142 703 aa16.89■□□□□ 0.29
CDKL1-202ENST00000356146 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
CDKL1-202ENST00000356146 NME9Q86XW9 330 aa16.88■□□□□ 0.29
CDKL1-202ENST00000356146 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms