RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 RAPGEF3O95398 923 aa18.81■□□□□ 0.6
VAT1-201ENST00000355653 TSPYL6Q8N831 410 aa18.81■□□□□ 0.6
VAT1-201ENST00000355653 ARID3AQ99856 593 aa18.81■□□□□ 0.6
VAT1-201ENST00000355653 RBM27Q9P2N5 1060 aaKnown RBP18.81■□□□□ 0.6
VAT1-201ENST00000355653 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
VAT1-201ENST00000355653 ZNF445P59923 1031 aa18.81■□□□□ 0.6
VAT1-201ENST00000355653 RABEP1Q15276 862 aa18.81■□□□□ 0.6
VAT1-201ENST00000355653 FYB1O15117 783 aa18.8■□□□□ 0.6
VAT1-201ENST00000355653 PRKAR2BP31323 418 aa18.8■□□□□ 0.6
VAT1-201ENST00000355653 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
VAT1-201ENST00000355653 NUCB2P80303 420 aa18.8■□□□□ 0.6
VAT1-201ENST00000355653 LMBRD1Q9NUN5 540 aa18.8■□□□□ 0.6
VAT1-201ENST00000355653 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
VAT1-201ENST00000355653 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
VAT1-201ENST00000355653 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
VAT1-201ENST00000355653 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
VAT1-201ENST00000355653 MED14O60244 1454 aa18.79■□□□□ 0.6
VAT1-201ENST00000355653 FBLN1P23142 703 aa18.79■□□□□ 0.6
VAT1-201ENST00000355653 CHAMP1Q96JM3 812 aa18.79■□□□□ 0.6
VAT1-201ENST00000355653 VGFO15240 615 aaPredicted RBP18.79■□□□□ 0.6
VAT1-201ENST00000355653 FRMPD1Q5SYB0 1578 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 ATAD2Q6PL18 1390 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 VAMP4O75379 141 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 HMOX1P09601 288 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
VAT1-201ENST00000355653 FOXD4L4Q8WXT5 416 aaPredicted RBP18.78■□□□□ 0.6
VAT1-201ENST00000355653 PPLO60437 1756 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 GLI2P10070 1586 aa18.78■□□□□ 0.6
VAT1-201ENST00000355653 C16orf71Q8IYS4 520 aaPredicted RBP18.78■□□□□ 0.6
VAT1-201ENST00000355653 ZGPATQ8N5A5 531 aaKnown RBP18.78■□□□□ 0.6
VAT1-201ENST00000355653 APBB1O00213 710 aa18.77■□□□□ 0.6
VAT1-201ENST00000355653 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
VAT1-201ENST00000355653 PLEKHM2Q8IWE5 1019 aa18.77■□□□□ 0.6
VAT1-201ENST00000355653 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.59
VAT1-201ENST00000355653 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.59
VAT1-201ENST00000355653 IDI1Q13907 227 aa18.76■□□□□ 0.59
VAT1-201ENST00000355653 UQCRHLA0A096LP55 91 aa18.76■□□□□ 0.59
VAT1-201ENST00000355653 UQCRHP07919 91 aa18.76■□□□□ 0.59
VAT1-201ENST00000355653 GPT2Q8TD30 523 aa18.76■□□□□ 0.59
VAT1-201ENST00000355653 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
VAT1-201ENST00000355653 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
VAT1-201ENST00000355653 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
VAT1-201ENST00000355653 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
VAT1-201ENST00000355653 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
VAT1-201ENST00000355653 SYCE3A1L190 88 aa18.74■□□□□ 0.59
VAT1-201ENST00000355653 FCHSD2O94868 740 aa18.74■□□□□ 0.59
VAT1-201ENST00000355653 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
VAT1-201ENST00000355653 CYP2E1P05181 493 aaPredicted RBP18.74■□□□□ 0.59
VAT1-201ENST00000355653 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
VAT1-201ENST00000355653 ZNF428Q96B54 188 aa18.74■□□□□ 0.59
VAT1-201ENST00000355653 HS1BP3Q53T59 392 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
VAT1-201ENST00000355653 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 ABCC3O15438 1527 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
VAT1-201ENST00000355653 RNF214Q8ND24 703 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
VAT1-201ENST00000355653 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 ABCC4O15439 1325 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 ST18O60284 1047 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
VAT1-201ENST00000355653 PDLIM2Q96JY6 352 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 MBIPQ9NS73 344 aa18.73■□□□□ 0.59
VAT1-201ENST00000355653 PTCH1Q13635 1447 aa18.72■□□□□ 0.59
VAT1-201ENST00000355653 ZNF500O60304 480 aaPredicted RBP18.72■□□□□ 0.59
VAT1-201ENST00000355653 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
VAT1-201ENST00000355653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
VAT1-201ENST00000355653 TERF1P54274 439 aa18.71■□□□□ 0.59
VAT1-201ENST00000355653 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
VAT1-201ENST00000355653 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
VAT1-201ENST00000355653 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
VAT1-201ENST00000355653 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
VAT1-201ENST00000355653 NFE2L2Q16236 605 aa18.7■□□□□ 0.58
VAT1-201ENST00000355653 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
VAT1-201ENST00000355653 ZDHHC9Q9Y397 364 aa18.7■□□□□ 0.58
VAT1-201ENST00000355653 CAMSAP1Q5T5Y3 1602 aa18.7■□□□□ 0.58
VAT1-201ENST00000355653 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
VAT1-201ENST00000355653 GNAI1P63096 354 aa18.7■□□□□ 0.58
VAT1-201ENST00000355653 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
VAT1-201ENST00000355653 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
VAT1-201ENST00000355653 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
VAT1-201ENST00000355653 SDSP20132 328 aa18.69■□□□□ 0.58
VAT1-201ENST00000355653 HDGFL2Q7Z4V5 671 aaPredicted RBP18.69■□□□□ 0.58
VAT1-201ENST00000355653 LRSAM1Q6UWE0 723 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 PRAM1Q96QH2 718 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
VAT1-201ENST00000355653 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
VAT1-201ENST00000355653 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
VAT1-201ENST00000355653 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
VAT1-201ENST00000355653 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
VAT1-201ENST00000355653 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
VAT1-201ENST00000355653 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
VAT1-201ENST00000355653 MAP7D2Q96T17 732 aa18.66■□□□□ 0.58
VAT1-201ENST00000355653 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
VAT1-201ENST00000355653 CABP1Q9NZU7 370 aa18.66■□□□□ 0.58
VAT1-201ENST00000355653 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms