RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 AGLP35573 1532 aa12.08□□□□□ -0.48
RPE-201ENST00000354506 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
RPE-201ENST00000354506 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
RPE-201ENST00000354506 IL13P35225 146 aa12.08□□□□□ -0.48
RPE-201ENST00000354506 AATKQ6ZMQ8 1374 aa12.07□□□□□ -0.48
RPE-201ENST00000354506 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
RPE-201ENST00000354506 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
RPE-201ENST00000354506 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
RPE-201ENST00000354506 TPRNQ4KMQ1 711 aa12.07□□□□□ -0.48
RPE-201ENST00000354506 SNX21Q969T3 373 aa12.07□□□□□ -0.48
RPE-201ENST00000354506 FSD2A1L4K1 749 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 PRKAR2BP31323 418 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 NFE2L2Q16236 605 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
RPE-201ENST00000354506 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 MCM4P33991 863 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 KIF2CQ99661 725 aa12.06□□□□□ -0.48
RPE-201ENST00000354506 TRAK2O60296 914 aa12.05□□□□□ -0.48
RPE-201ENST00000354506 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
RPE-201ENST00000354506 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
RPE-201ENST00000354506 ABCC4O15439 1325 aa12.05□□□□□ -0.48
RPE-201ENST00000354506 BMP2KLQ5H9B9 411 aa12.05□□□□□ -0.48
RPE-201ENST00000354506 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
RPE-201ENST00000354506 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 ARID3AQ99856 593 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 KNDC1Q76NI1 1749 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 C3P01024 1663 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
RPE-201ENST00000354506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.487e-7■□□□□ 9.5
RPE-201ENST00000354506 HMOX1P09601 288 aa12.03□□□□□ -0.48
RPE-201ENST00000354506 FOXD4L5Q5VV16 416 aaPredicted RBP12.02□□□□□ -0.48
RPE-201ENST00000354506 FOXD4L4Q8WXT5 416 aaPredicted RBP12.02□□□□□ -0.48
RPE-201ENST00000354506 MBIPQ9NS73 344 aa12.02□□□□□ -0.48
RPE-201ENST00000354506 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.48
RPE-201ENST00000354506 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 CPS1P31327 1500 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
RPE-201ENST00000354506 ANKRD45Q5TZF3 282 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 NRKQ7Z2Y5 1582 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 HSCBQ8IWL3 235 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 SIRT1Q96EB6 747 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 CHAMP1Q96JM3 812 aa12.02□□□□□ -0.49
RPE-201ENST00000354506 TECPR2O15040 1411 aa12.01□□□□□ -0.49
RPE-201ENST00000354506 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
RPE-201ENST00000354506 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
RPE-201ENST00000354506 GNAI1P63096 354 aa12.01□□□□□ -0.49
RPE-201ENST00000354506 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
RPE-201ENST00000354506 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
RPE-201ENST00000354506 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
RPE-201ENST00000354506 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
RPE-201ENST00000354506 L1TD1Q5T7N2 865 aaKnown RBP12.01□□□□□ -0.49
RPE-201ENST00000354506 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
RPE-201ENST00000354506 METP08581 1390 aa12□□□□□ -0.49
RPE-201ENST00000354506 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
RPE-201ENST00000354506 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
RPE-201ENST00000354506 NME9Q86XW9 330 aa11.99□□□□□ -0.49
RPE-201ENST00000354506 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
RPE-201ENST00000354506 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
RPE-201ENST00000354506 RGS12O14924 1447 aa11.98□□□□□ -0.49
RPE-201ENST00000354506 SOX12O15370 315 aa11.98□□□□□ -0.49
RPE-201ENST00000354506 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
RPE-201ENST00000354506 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
RPE-201ENST00000354506 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
RPE-201ENST00000354506 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
RPE-201ENST00000354506 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
RPE-201ENST00000354506 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
RPE-201ENST00000354506 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
RPE-201ENST00000354506 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
RPE-201ENST00000354506 RAB3GAP1Q15042 981 aa11.96□□□□□ -0.49
RPE-201ENST00000354506 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
RPE-201ENST00000354506 DCTN1Q14203 1278 aa11.96□□□□□ -0.5
RPE-201ENST00000354506 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.5
RPE-201ENST00000354506 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.5
RPE-201ENST00000354506 DCTPP1Q9H773 170 aa11.96□□□□□ -0.5
RPE-201ENST00000354506 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.5
RPE-201ENST00000354506 LMOD3Q0VAK6 560 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 CLEC17AQ6ZS10 378 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 MPNDQ8N594 471 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
RPE-201ENST00000354506 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
RPE-201ENST00000354506 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 SSFA2P28290 1259 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
RPE-201ENST00000354506 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
RPE-201ENST00000354506 GRPEL1Q9HAV7 217 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 DTNBO60941 627 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms