RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
LRP8-203ENST00000354412 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 KIF2CQ99661 725 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
LRP8-203ENST00000354412 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
LRP8-203ENST00000354412 TERF1P54274 439 aa17.24■□□□□ 0.35
LRP8-203ENST00000354412 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
LRP8-203ENST00000354412 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
LRP8-203ENST00000354412 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
LRP8-203ENST00000354412 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
LRP8-203ENST00000354412 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
LRP8-203ENST00000354412 OFD1O75665 1012 aa17.22■□□□□ 0.35
LRP8-203ENST00000354412 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
LRP8-203ENST00000354412 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
LRP8-203ENST00000354412 STK26Q9P289 416 aa17.22■□□□□ 0.35
LRP8-203ENST00000354412 RIPK4P57078 832 aa17.21■□□□□ 0.35
LRP8-203ENST00000354412 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
LRP8-203ENST00000354412 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
LRP8-203ENST00000354412 NUCB2P80303 420 aa17.2■□□□□ 0.34
LRP8-203ENST00000354412 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
LRP8-203ENST00000354412 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
LRP8-203ENST00000354412 PTPRMP28827 1452 aa17.19■□□□□ 0.34
LRP8-203ENST00000354412 SSFA2P28290 1259 aa17.19■□□□□ 0.34
LRP8-203ENST00000354412 ZNF445P59923 1031 aa17.19■□□□□ 0.34
LRP8-203ENST00000354412 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
LRP8-203ENST00000354412 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
LRP8-203ENST00000354412 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
LRP8-203ENST00000354412 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
LRP8-203ENST00000354412 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
LRP8-203ENST00000354412 CDC45O75419 566 aa17.17■□□□□ 0.34
LRP8-203ENST00000354412 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
LRP8-203ENST00000354412 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
LRP8-203ENST00000354412 RABEP1Q15276 862 aa17.17■□□□□ 0.34
LRP8-203ENST00000354412 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
LRP8-203ENST00000354412 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
LRP8-203ENST00000354412 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
LRP8-203ENST00000354412 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
LRP8-203ENST00000354412 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
LRP8-203ENST00000354412 MED14O60244 1454 aa17.15■□□□□ 0.34
LRP8-203ENST00000354412 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
LRP8-203ENST00000354412 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
LRP8-203ENST00000354412 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
LRP8-203ENST00000354412 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
LRP8-203ENST00000354412 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
LRP8-203ENST00000354412 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
LRP8-203ENST00000354412 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
LRP8-203ENST00000354412 FCHSD2O94868 740 aa17.13■□□□□ 0.33
LRP8-203ENST00000354412 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
LRP8-203ENST00000354412 ZNF500O60304 480 aaPredicted RBP17.12■□□□□ 0.33
LRP8-203ENST00000354412 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
LRP8-203ENST00000354412 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
LRP8-203ENST00000354412 ZSCAN23Q3MJ62 389 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
LRP8-203ENST00000354412 MCM5P33992 734 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
LRP8-203ENST00000354412 GGNBP2Q9H3C7 697 aa17.11■□□□□ 0.33
LRP8-203ENST00000354412 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
LRP8-203ENST00000354412 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
LRP8-203ENST00000354412 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
LRP8-203ENST00000354412 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
LRP8-203ENST00000354412 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
LRP8-203ENST00000354412 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
LRP8-203ENST00000354412 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
LRP8-203ENST00000354412 MTERF4Q7Z6M4 381 aaKnown RBP17.09■□□□□ 0.33
LRP8-203ENST00000354412 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.33
LRP8-203ENST00000354412 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
LRP8-203ENST00000354412 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
LRP8-203ENST00000354412 VAMP4O75379 141 aa17.08■□□□□ 0.32
LRP8-203ENST00000354412 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
LRP8-203ENST00000354412 FYB1O15117 783 aa17.07■□□□□ 0.32
LRP8-203ENST00000354412 ST18O60284 1047 aa17.07■□□□□ 0.32
LRP8-203ENST00000354412 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
LRP8-203ENST00000354412 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
LRP8-203ENST00000354412 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
LRP8-203ENST00000354412 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
LRP8-203ENST00000354412 NRXN3Q9Y4C0 1643 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 SIRT2Q8IXJ6 389 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
LRP8-203ENST00000354412 GNAI1P63096 354 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 USP26Q9BXU7 913 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
LRP8-203ENST00000354412 ABCC4O15439 1325 aa17.06■□□□□ 0.32
LRP8-203ENST00000354412 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
LRP8-203ENST00000354412 RBSNQ9H1K0 784 aa17.05■□□□□ 0.32
LRP8-203ENST00000354412 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
LRP8-203ENST00000354412 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
LRP8-203ENST00000354412 ZKSCAN5Q9Y2L8 839 aa17.05■□□□□ 0.32
LRP8-203ENST00000354412 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
LRP8-203ENST00000354412 GSPT1P15170 499 aaKnown RBP17.04■□□□□ 0.32
LRP8-203ENST00000354412 PRIM1P49642 420 aaKnown RBP17.04■□□□□ 0.32
LRP8-203ENST00000354412 TTC22Q5TAA0 569 aa17.04■□□□□ 0.32
LRP8-203ENST00000354412 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
LRP8-203ENST00000354412 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms