RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 NLRP6P59044 892 aa22.95■■□□□ 1.26
APP-203ENST00000354192 GNAI1P63096 354 aa22.95■■□□□ 1.26
APP-203ENST00000354192 NFKBIBQ15653 356 aa22.95■■□□□ 1.26
APP-203ENST00000354192 SLC4A10Q6U841 1118 aa22.95■■□□□ 1.26
APP-203ENST00000354192 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
APP-203ENST00000354192 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
APP-203ENST00000354192 VAMP4O75379 141 aa22.93■■□□□ 1.26
APP-203ENST00000354192 FRAT2O75474 233 aaPredicted RBP22.93■■□□□ 1.26
APP-203ENST00000354192 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
APP-203ENST00000354192 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
APP-203ENST00000354192 RTN4Q9NQC3 1192 aaKnown RBP22.91■■□□□ 1.26
APP-203ENST00000354192 XPCQ01831 940 aaPredicted RBP22.91■■□□□ 1.26
APP-203ENST00000354192 USHBP1Q8N6Y0 703 aa22.9■■□□□ 1.26
APP-203ENST00000354192 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
APP-203ENST00000354192 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
APP-203ENST00000354192 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
APP-203ENST00000354192 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
APP-203ENST00000354192 ZBTB40Q9NUA8 1239 aa22.87■■□□□ 1.25
APP-203ENST00000354192 CT47B1P0C2W7 299 aaPredicted RBP22.86■■□□□ 1.25
APP-203ENST00000354192 KCNA6P17658 529 aa22.86■■□□□ 1.25
APP-203ENST00000354192 BECN1Q14457 450 aa22.86■■□□□ 1.25
APP-203ENST00000354192 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
APP-203ENST00000354192 CPS1P31327 1500 aa22.86■■□□□ 1.25
APP-203ENST00000354192 ABTB2Q8N961 1025 aa22.86■■□□□ 1.25
APP-203ENST00000354192 MRPL50Q8N5N7 158 aaKnown RBP22.85■■□□□ 1.25
APP-203ENST00000354192 PNPLA6Q8IY17 1366 aa22.85■■□□□ 1.25
APP-203ENST00000354192 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
APP-203ENST00000354192 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
APP-203ENST00000354192 LRRC7Q96NW7 1537 aa22.84■■□□□ 1.25
APP-203ENST00000354192 CFAP44Q96MT7 982 aa22.84■■□□□ 1.25
APP-203ENST00000354192 IL16Q14005 1332 aa22.84■■□□□ 1.25
APP-203ENST00000354192 COL3A1P02461 1466 aaPredicted RBP22.84■■□□□ 1.25
APP-203ENST00000354192 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
APP-203ENST00000354192 USP19O94966 1318 aa22.84■■□□□ 1.25
APP-203ENST00000354192 F6X3S4 739 aa22.83■■□□□ 1.25
APP-203ENST00000354192 MAP3K19Q56UN5 1328 aa22.83■■□□□ 1.25
APP-203ENST00000354192 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.24
APP-203ENST00000354192 SLC4A2P04920 1241 aa22.81■■□□□ 1.24
APP-203ENST00000354192 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
APP-203ENST00000354192 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
APP-203ENST00000354192 ALDH1L2Q3SY69 923 aa22.8■■□□□ 1.24
APP-203ENST00000354192 MAP2P11137 1827 aaKnown RBP22.79■■□□□ 1.24
APP-203ENST00000354192 CHD1LQ86WJ1 897 aa22.79■■□□□ 1.24
APP-203ENST00000354192 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
APP-203ENST00000354192 MTHFSDQ2M296 383 aaKnown RBP22.79■■□□□ 1.24
APP-203ENST00000354192 CPSF1Q10570 1443 aaKnown RBP22.78■■□□□ 1.24
APP-203ENST00000354192 ATP7BP35670 1465 aa22.78■■□□□ 1.24
APP-203ENST00000354192 ZBTB7BO15156 539 aaPredicted RBP22.78■■□□□ 1.24
APP-203ENST00000354192 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
APP-203ENST00000354192 C16orf71Q8IYS4 520 aaPredicted RBP22.77■■□□□ 1.23
APP-203ENST00000354192 ESCO1Q5FWF5 840 aa22.76■■□□□ 1.23
APP-203ENST00000354192 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
APP-203ENST00000354192 HDAC1Q13547 482 aaPredicted RBP22.76■■□□□ 1.23
APP-203ENST00000354192 EYA1Q99502 592 aa22.76■■□□□ 1.23
APP-203ENST00000354192 SPATA31D1Q6ZQQ2 1576 aa22.76■■□□□ 1.23
APP-203ENST00000354192 AAMPQ13685 434 aa22.75■■□□□ 1.23
APP-203ENST00000354192 TBC1D2Q9BYX2 928 aa22.75■■□□□ 1.23
APP-203ENST00000354192 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
APP-203ENST00000354192 GZF1Q9H116 711 aaPredicted RBP22.75■■□□□ 1.23
APP-203ENST00000354192 AGLP35573 1532 aa22.74■■□□□ 1.23
APP-203ENST00000354192 EIF2S2P20042 333 aaKnown RBP22.74■■□□□ 1.23
APP-203ENST00000354192 G2E3Q7L622 706 aa22.74■■□□□ 1.23
APP-203ENST00000354192 API5Q9BZZ5 524 aaKnown RBP22.74■■□□□ 1.23
APP-203ENST00000354192 SMC5Q8IY18 1101 aa22.73■■□□□ 1.23
APP-203ENST00000354192 TBC1D32Q96NH3 1257 aa22.73■■□□□ 1.23
APP-203ENST00000354192 ADAMTS13Q76LX8 1427 aa22.73■■□□□ 1.23
APP-203ENST00000354192 SIRT2Q8IXJ6 389 aa22.72■■□□□ 1.23
APP-203ENST00000354192 MEIS3Q99687 375 aa22.72■■□□□ 1.23
APP-203ENST00000354192 PSME1Q06323 249 aa22.71■■□□□ 1.23
APP-203ENST00000354192 NUCB1Q02818 461 aa22.71■■□□□ 1.23
APP-203ENST00000354192 PLEKHG3A1L390 1219 aa22.7■■□□□ 1.22
APP-203ENST00000354192 PTPRUQ92729 1446 aa22.7■■□□□ 1.22
APP-203ENST00000354192 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
APP-203ENST00000354192 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
APP-203ENST00000354192 OTUD7AQ8TE49 926 aaPredicted RBP22.7■■□□□ 1.22
APP-203ENST00000354192 MED14O60244 1454 aa22.69■■□□□ 1.22
APP-203ENST00000354192 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
APP-203ENST00000354192 TSHZ3Q63HK5 1081 aa22.69■■□□□ 1.22
APP-203ENST00000354192 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
APP-203ENST00000354192 IL27Q8NEV9 243 aa22.68■■□□□ 1.22
APP-203ENST00000354192 GSE1Q14687 1217 aa22.67■■□□□ 1.22
APP-203ENST00000354192 STK31Q9BXU1 1019 aa22.67■■□□□ 1.22
APP-203ENST00000354192 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
APP-203ENST00000354192 HSCBQ8IWL3 235 aa22.66■■□□□ 1.22
APP-203ENST00000354192 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
APP-203ENST00000354192 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
APP-203ENST00000354192 USP6P35125 1406 aa22.66■■□□□ 1.22
APP-203ENST00000354192 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
APP-203ENST00000354192 AATKQ6ZMQ8 1374 aa22.65■■□□□ 1.22
APP-203ENST00000354192 ANXA1P04083 346 aa22.65■■□□□ 1.22
APP-203ENST00000354192 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.22
APP-203ENST00000354192 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.21
APP-203ENST00000354192 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.21
APP-203ENST00000354192 CHL1O00533 1208 aa22.64■■□□□ 1.21
APP-203ENST00000354192 EXOC6BQ9Y2D4 811 aa22.64■■□□□ 1.21
APP-203ENST00000354192 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
APP-203ENST00000354192 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
APP-203ENST00000354192 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
APP-203ENST00000354192 KIF20BQ96Q89 1820 aa22.63■■□□□ 1.21
APP-203ENST00000354192 CHMP4BQ9H444 224 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms