RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 CT47B1P0C2W7 299 aaPredicted RBP21.06■□□□□ 0.96
PDAP1-201ENST00000350498 MBIPQ9NS73 344 aa21.06■□□□□ 0.96
PDAP1-201ENST00000350498 VAMP4O75379 141 aa21.06■□□□□ 0.96
PDAP1-201ENST00000350498 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
PDAP1-201ENST00000350498 TMEM2Q9UHN6 1383 aa21.05■□□□□ 0.96
PDAP1-201ENST00000350498 C8orf58Q8NAV2 365 aa21.05■□□□□ 0.96
PDAP1-201ENST00000350498 ZBTB40Q9NUA8 1239 aa21.05■□□□□ 0.96
PDAP1-201ENST00000350498 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
PDAP1-201ENST00000350498 KRT24Q2M2I5 525 aa21.04■□□□□ 0.96
PDAP1-201ENST00000350498 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
PDAP1-201ENST00000350498 ACEP12821 1306 aa21.02■□□□□ 0.96
PDAP1-201ENST00000350498 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.96
PDAP1-201ENST00000350498 ADAMTS13Q76LX8 1427 aa21.02■□□□□ 0.96
PDAP1-201ENST00000350498 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
PDAP1-201ENST00000350498 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
PDAP1-201ENST00000350498 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.01■□□□□ 0.95
PDAP1-201ENST00000350498 AAMPQ13685 434 aa21■□□□□ 0.95
PDAP1-201ENST00000350498 SULT6B1Q6IMI4 303 aa21■□□□□ 0.95
PDAP1-201ENST00000350498 EIF4A2Q14240 407 aaKnown RBP21■□□□□ 0.95
PDAP1-201ENST00000350498 TBC1D2Q9BYX2 928 aa21■□□□□ 0.95
PDAP1-201ENST00000350498 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
PDAP1-201ENST00000350498 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
PDAP1-201ENST00000350498 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
PDAP1-201ENST00000350498 KIF16BQ96L93 1317 aa20.99■□□□□ 0.95
PDAP1-201ENST00000350498 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
PDAP1-201ENST00000350498 PTPRUQ92729 1446 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 TBC1D32Q96NH3 1257 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 ARXQ96QS3 562 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 MCM10Q7L590 875 aa20.98■□□□□ 0.95
PDAP1-201ENST00000350498 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
PDAP1-201ENST00000350498 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
PDAP1-201ENST00000350498 ALDH1L2Q3SY69 923 aa20.97■□□□□ 0.95
PDAP1-201ENST00000350498 MON2Q7Z3U7 1717 aa20.97■□□□□ 0.95
PDAP1-201ENST00000350498 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
PDAP1-201ENST00000350498 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
PDAP1-201ENST00000350498 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
PDAP1-201ENST00000350498 TECPR2O15040 1411 aa20.96■□□□□ 0.95
PDAP1-201ENST00000350498 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
PDAP1-201ENST00000350498 BECN1Q14457 450 aa20.96■□□□□ 0.95
PDAP1-201ENST00000350498 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
PDAP1-201ENST00000350498 AATKQ6ZMQ8 1374 aa20.96■□□□□ 0.95
PDAP1-201ENST00000350498 ZBTB7BO15156 539 aaPredicted RBP20.96■□□□□ 0.95
PDAP1-201ENST00000350498 C3P01024 1663 aa20.95■□□□□ 0.94
PDAP1-201ENST00000350498 GNAI1P63096 354 aa20.95■□□□□ 0.94
PDAP1-201ENST00000350498 IFT57Q9NWB7 429 aa20.95■□□□□ 0.94
PDAP1-201ENST00000350498 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
PDAP1-201ENST00000350498 AKAP12Q02952 1782 aa20.94■□□□□ 0.94
PDAP1-201ENST00000350498 FOXO3O43524 673 aa20.94■□□□□ 0.94
PDAP1-201ENST00000350498 SIRT2Q8IXJ6 389 aa20.94■□□□□ 0.94
PDAP1-201ENST00000350498 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
PDAP1-201ENST00000350498 AMOTL2Q9Y2J4 779 aa20.94■□□□□ 0.94
PDAP1-201ENST00000350498 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
PDAP1-201ENST00000350498 UPF2Q9HAU5 1272 aaKnown RBP20.93■□□□□ 0.94
PDAP1-201ENST00000350498 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
PDAP1-201ENST00000350498 ITSN1Q15811 1721 aa20.92■□□□□ 0.94
PDAP1-201ENST00000350498 NUTM2GQ5VZR2 741 aa20.92■□□□□ 0.94
PDAP1-201ENST00000350498 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
PDAP1-201ENST00000350498 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
PDAP1-201ENST00000350498 NUCB1Q02818 461 aa20.89■□□□□ 0.94
PDAP1-201ENST00000350498 ANKRD45Q5TZF3 282 aa20.89■□□□□ 0.94
PDAP1-201ENST00000350498 PEAK1Q9H792 1746 aa20.89■□□□□ 0.93
PDAP1-201ENST00000350498 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
PDAP1-201ENST00000350498 USP6P35125 1406 aa20.87■□□□□ 0.93
PDAP1-201ENST00000350498 PLEKHG3A1L390 1219 aa20.87■□□□□ 0.93
PDAP1-201ENST00000350498 PLEKHG1Q9ULL1 1385 aa20.87■□□□□ 0.93
PDAP1-201ENST00000350498 BRPF1P55201 1214 aaPredicted RBP20.86■□□□□ 0.93
PDAP1-201ENST00000350498 C22orf23Q9BZE7 217 aa20.86■□□□□ 0.93
PDAP1-201ENST00000350498 OVOS2A0A0J9YW53 1432 aa20.86■□□□□ 0.93
PDAP1-201ENST00000350498 MAP3K19Q56UN5 1328 aa20.86■□□□□ 0.93
PDAP1-201ENST00000350498 OVOS2Q6IE36 1432 aa20.86■□□□□ 0.93
PDAP1-201ENST00000350498 GZF1Q9H116 711 aaPredicted RBP20.86■□□□□ 0.93
PDAP1-201ENST00000350498 RGPD8O14715 1765 aaPredicted RBP20.86■□□□□ 0.93
PDAP1-201ENST00000350498 CALD1Q05682 793 aaKnown RBP20.85■□□□□ 0.93
PDAP1-201ENST00000350498 RIMS1Q86UR5 1692 aaKnown RBP20.85■□□□□ 0.93
PDAP1-201ENST00000350498 ABCC4O15439 1325 aa20.84■□□□□ 0.93
PDAP1-201ENST00000350498 PTCH1Q13635 1447 aa20.84■□□□□ 0.93
PDAP1-201ENST00000350498 EID1Q9Y6B2 187 aa20.84■□□□□ 0.93
PDAP1-201ENST00000350498 NGDNQ8NEJ9 315 aaKnown RBP20.83■□□□□ 0.93
PDAP1-201ENST00000350498 NRKQ7Z2Y5 1582 aa20.83■□□□□ 0.93
PDAP1-201ENST00000350498 LMOD3Q0VAK6 560 aa20.82■□□□□ 0.92
PDAP1-201ENST00000350498 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
PDAP1-201ENST00000350498 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
PDAP1-201ENST00000350498 ZNF428Q96B54 188 aa20.82■□□□□ 0.92
PDAP1-201ENST00000350498 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
PDAP1-201ENST00000350498 PIK3R4Q99570 1358 aa20.8■□□□□ 0.92
PDAP1-201ENST00000350498 TOPAZ1Q8N9V7 1692 aa20.8■□□□□ 0.92
PDAP1-201ENST00000350498 CHL1O00533 1208 aa20.8■□□□□ 0.92
PDAP1-201ENST00000350498 APBB1O00213 710 aa20.79■□□□□ 0.92
PDAP1-201ENST00000350498 KCNA6P17658 529 aa20.79■□□□□ 0.92
PDAP1-201ENST00000350498 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
PDAP1-201ENST00000350498 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
PDAP1-201ENST00000350498 EYA1Q99502 592 aa20.78■□□□□ 0.92
PDAP1-201ENST00000350498 G2E3Q7L622 706 aa20.78■□□□□ 0.92
PDAP1-201ENST00000350498 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
PDAP1-201ENST00000350498 F6X3S4 739 aa20.76■□□□□ 0.91
PDAP1-201ENST00000350498 AMPHP49418 695 aa20.76■□□□□ 0.91
PDAP1-201ENST00000350498 NLRP6P59044 892 aa20.76■□□□□ 0.91
PDAP1-201ENST00000350498 OTUD7AQ8TE49 926 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms